Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1419
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.60 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.60 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.4  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 539 KILLLITKMYIINEI*VTILFIELFLCRY 453
           KILL+I   Y+  ++ V   F++LFL  Y
Sbjct: 212 KILLMIQLYYLYFDVIVISTFLQLFLEHY 240


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 539 KILLLITKMYIINEI*VTILFIELFLCRY 453
           KILL+I   Y+  ++ V   F++LFL  Y
Sbjct: 138 KILLMIQLYYLYFDVIVISTFLQLFLEHY 166


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = -1

Query: 632 WGFSIICQIKSVI*ISDKVLHEETLLHFVITKILLLI 522
           W FS  C++ +++ I+ +   E  ++  V T +++LI
Sbjct: 330 WAFSNACEVMAIVWITSETCEE--IVAGVTTYLVILI 364


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 454 YLHKNNSIKRIVT*ISLMIYILVISSSIFVITKCNRVSSCS 576
           YLHK  +++ +   ISL + IL + S  F  +  N  S  S
Sbjct: 309 YLHKATTLETVYYFISLGLLILRLVSVCFYGSWINEESKLS 349


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = -1

Query: 632 WGFSIICQIKSVI*ISDKVLHE 567
           W FS  C++ +++ I+ +   E
Sbjct: 330 WAFSNACEVMAIVWITSETCEE 351


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +1

Query: 298 EKYFVLLKLDLICGMLSCPIFCN--FYKLC 381
           E YF L K    C +++  ++C+   + LC
Sbjct: 395 ETYFRLSKTKTFCTLVTALVYCSLAIFVLC 424


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,488
Number of Sequences: 336
Number of extensions: 3150
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)