Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1419
         (707 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              25   0.53 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   2.1  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   2.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   8.7  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 25.4 bits (53), Expect = 0.53
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 566 ETLLHFVITKILLLITKMYIINEI 495
           +T +H  ITKI   ITK   IN+I
Sbjct: 109 DTNVHLKITKIFQCITKFKTINDI 132


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/17 (41%), Positives = 15/17 (88%)
 Frame = +1

Query: 259 EIVKHMNVTKFMLEKYF 309
           ++VK++++ +F LEK+F
Sbjct: 199 QVVKNLHLPRFTLEKFF 215


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/17 (41%), Positives = 15/17 (88%)
 Frame = +1

Query: 259 EIVKHMNVTKFMLEKYF 309
           ++VK++++ +F LEK+F
Sbjct: 199 QVVKNLHLPRFTLEKFF 215


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = -1

Query: 359 KIGQLNIPQIKSSFKRTKYFSSMNLVTFICFTISAVYDYLTNNLITTCRY 210
           K+ +LN     + ++R ++     LVT I   I  V   L N L+    Y
Sbjct: 42  KMRELNATACAALYERVEWSGPWILVTLIVLAIVNVMVVLGNVLVILAVY 91


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 182 KWCSNVESAYTCMWLLNCWLNNHTR 256
           K C  +   +T +WL   WL N T+
Sbjct: 215 KMCDILHLRHTKIWLRPDWLFNLTK 239


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,727
Number of Sequences: 438
Number of extensions: 3860
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)