Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1414
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   3.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.4  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   6.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   6.0  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 239 TLIMPNFYFTIFRKSMCFW 183
           TLI+  F+F  +R+++  W
Sbjct: 645 TLILDKFFFPRWRQTLAMW 663


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +3

Query: 267  KIVSCLSIL-NCRYLYICKY 323
            KI  C ++L NC YL++C +
Sbjct: 1120 KIRICWNVLLNCVYLFLCGF 1139


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 21/77 (27%), Positives = 34/77 (44%)
 Frame = -3

Query: 294 SILTSNSRFYEVF*LYIYNIDNAKFLFYYFQKEYVLLELVIINIKNKKSVFIAILTNNNK 115
           +ILTS+   +  F  Y+Y   +  F F        L+ + I+++  K+ V       N K
Sbjct: 52  TILTSSVTLHVCFNSYMYAFTHIFFFFAICCDFIALIVVNIVHVFRKRRV-------NYK 104

Query: 114 IVEIQLFLSFVFFLTIT 64
              I L ++  FFL  T
Sbjct: 105 DSNIGLVVANAFFLLWT 121


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
 Frame = +3

Query: 261 LHKIVSCLSILNCRYLYICKYVMNTCNL*LRPLTFCC*SNAY--YTI*NEFLKFDLCGFY 434
           ++  V  L  L C Y + C +++ T +L    L   C  + +  + I    L F  C F 
Sbjct: 133 IYYFVVPLFFLLCIYYFYCAFIIFTVHL----LFLLCIYHFFCAFIIFTMHLLF-CCAFI 187

Query: 435 FCDMTGLSNLRSSRNAHEYCK*KINCFLLSRMIVFRSPAAMYT*LQ*IIYSVLIFVCYIF 614
           F +M  L  L       +Y    ++   L  +  F S   ++T +  + Y VLI +  I+
Sbjct: 188 FFNMHLLFLL-----CLDYFT--LHLLFLPCIYYFYSAFIIFT-IHLLFYCVLIILLCIY 239

Query: 615 IYPGMFILFQWNNLL 659
            +   FILF  + LL
Sbjct: 240 YFYYAFILFTVHLLL 254


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 724 VVYFKIYLHFLYIL 683
           V YF+ Y+HF Y L
Sbjct: 152 VEYFQNYIHFFYQL 165


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 119 LLFVSIAINTDFLFLILIITNSKST 193
           +LFV +   T  +FL+LI  +  +T
Sbjct: 237 ILFVGVIYTTYTIFLLLIFGSGSAT 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,604
Number of Sequences: 336
Number of extensions: 3932
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)