Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1414
(740 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112897-1|AAI12898.1| 906|Homo sapiens CLEC16A protein protein. 38 0.029
AB002348-1|BAA20807.3| 1062|Homo sapiens KIAA0350 protein protein. 38 0.029
BC051738-1|AAH51738.1| 696|Homo sapiens SLIT and NTRK-like fami... 34 0.47
AY358289-1|AAQ88656.1| 696|Homo sapiens LLWI233 protein. 34 0.62
AL355481-1|CAC37488.1| 696|Homo sapiens SLIT and NTRK-like fami... 34 0.62
AB067497-1|BAB67803.1| 760|Homo sapiens KIAA1910 protein protein. 34 0.62
BC036755-1|AAH36755.1| 690|Homo sapiens ligand of numb-protein ... 32 2.5
AL138699-1|CAH73446.1| 690|Homo sapiens ligand of numb-protein ... 32 2.5
>BC112897-1|AAI12898.1| 906|Homo sapiens CLEC16A protein protein.
Length = 906
Score = 38.3 bits (85), Expect = 0.029
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Frame = -3
Query: 246 IYNIDNAKFLFYYFQKEYVLLE----LVIINIKNKKSVFIAILTNNNKIVEIQLFLS-FV 82
I+++D+ K+L++ K + E L++ I++ + I N++ + + L + FV
Sbjct: 20 IHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIWGDQNDSSVFDFFLEKNMFV 79
Query: 81 FFLTITKQKQSKY*ALCFQLLNIFIIL 1
FFL I +QK +Y +C QLL IL
Sbjct: 80 FFLNILRQKSGRY--VCVQLLQTLNIL 104
>AB002348-1|BAA20807.3| 1062|Homo sapiens KIAA0350 protein protein.
Length = 1062
Score = 38.3 bits (85), Expect = 0.029
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Frame = -3
Query: 246 IYNIDNAKFLFYYFQKEYVLLE----LVIINIKNKKSVFIAILTNNNKIVEIQLFLS-FV 82
I+++D+ K+L++ K + E L++ I++ + I N++ + + L + FV
Sbjct: 29 IHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIWGDQNDSSVFDFFLEKNMFV 88
Query: 81 FFLTITKQKQSKY*ALCFQLLNIFIIL 1
FFL I +QK +Y +C QLL IL
Sbjct: 89 FFLNILRQKSGRY--VCVQLLQTLNIL 113
>BC051738-1|AAH51738.1| 696|Homo sapiens SLIT and NTRK-like family,
member 1 protein.
Length = 696
Score = 34.3 bits (75), Expect = 0.47
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = -3
Query: 534 QSFLIKENN*FFIYNIRE-HFLNFANLITLSCHKNKIHKDQTSKIRSILCSRHYFSNKKL 358
Q +++N I++IR+ HF+++ NLI L N I + + +++L R + +
Sbjct: 378 QELFLRDNK---IHSIRKSHFVDYKNLILLDLGNNNIATVENNSFKNLLDLRWLYMDSNY 434
Query: 357 ADE-ARDYRYSLHTYKYINT-YNSI 289
D +R+ L +Y+N YN+I
Sbjct: 435 LDTLSREKFAGLQNLEYLNVEYNAI 459
>AY358289-1|AAQ88656.1| 696|Homo sapiens LLWI233 protein.
Length = 696
Score = 33.9 bits (74), Expect = 0.62
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = -3
Query: 534 QSFLIKENN*FFIYNIRE-HFLNFANLITLSCHKNKIHKDQTSKIRSILCSRHYFSNKKL 358
Q +++N I++IR+ HF+++ NLI L N I + + +++L R + +
Sbjct: 378 QELFLRDNK---IHSIRKSHFVDYKNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNY 434
Query: 357 ADE-ARDYRYSLHTYKYINT-YNSI 289
D +R+ L +Y+N YN+I
Sbjct: 435 LDTLSREKFAGLQNLEYLNVEYNAI 459
>AL355481-1|CAC37488.1| 696|Homo sapiens SLIT and NTRK-like family,
member 1 protein.
Length = 696
Score = 33.9 bits (74), Expect = 0.62
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = -3
Query: 534 QSFLIKENN*FFIYNIRE-HFLNFANLITLSCHKNKIHKDQTSKIRSILCSRHYFSNKKL 358
Q +++N I++IR+ HF+++ NLI L N I + + +++L R + +
Sbjct: 378 QELFLRDNK---IHSIRKSHFVDYKNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNY 434
Query: 357 ADE-ARDYRYSLHTYKYINT-YNSI 289
D +R+ L +Y+N YN+I
Sbjct: 435 LDTLSREKFAGLQNLEYLNVEYNAI 459
>AB067497-1|BAB67803.1| 760|Homo sapiens KIAA1910 protein protein.
Length = 760
Score = 33.9 bits (74), Expect = 0.62
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = -3
Query: 534 QSFLIKENN*FFIYNIRE-HFLNFANLITLSCHKNKIHKDQTSKIRSILCSRHYFSNKKL 358
Q +++N I++IR+ HF+++ NLI L N I + + +++L R + +
Sbjct: 442 QELFLRDNK---IHSIRKSHFVDYKNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNY 498
Query: 357 ADE-ARDYRYSLHTYKYINT-YNSI 289
D +R+ L +Y+N YN+I
Sbjct: 499 LDTLSREKFAGLQNLEYLNVEYNAI 523
>BC036755-1|AAH36755.1| 690|Homo sapiens ligand of numb-protein X 2
protein.
Length = 690
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 228 HYQCCKCKVKKLHKIVSCLSILNCRYLYICKYVMNTCNL 344
H++ CK +HK++ L +L C + +CK VM C+L
Sbjct: 92 HFKLCKKSSILVHKLLDKLLVL-CPFSSVCKDVMQRCDL 129
>AL138699-1|CAH73446.1| 690|Homo sapiens ligand of numb-protein X 2
protein.
Length = 690
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 228 HYQCCKCKVKKLHKIVSCLSILNCRYLYICKYVMNTCNL 344
H++ CK +HK++ L +L C + +CK VM C+L
Sbjct: 92 HFKLCKKSSILVHKLLDKLLVL-CPFSSVCKDVMQRCDL 129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,483,784
Number of Sequences: 237096
Number of extensions: 1767520
Number of successful extensions: 6171
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6165
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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