Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1409
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.4  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -3

Query: 530 IFKGNQCKIIINTHEMNQHKIYINLENIYHVEYKNISIN 414
           + K ++ K    TH    H IY +++ +Y +  K I +N
Sbjct: 1   MIKFSKVKSYFTTHHDTLHNIYTSMKPVYAI-CKLIGLN 38


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -3

Query: 530 IFKGNQCKIIINTHEMNQHKIYINLENIYHVEYKNISIN 414
           + K ++ K    TH    H IY +++ +Y +  K I +N
Sbjct: 1   MIKFSKVKSYFTTHHDTLHNIYTSMKPVYAI-CKLIGLN 38


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 500 INTHEMNQHKIYINLEN-IYHVEYKNI 423
           IN       +I  ++ + IY+VEYKN+
Sbjct: 307 INAESRKPIRILFDVSSEIYNVEYKNV 333


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 165 SGIFCLANINYERLHSR 215
           S IFCL N N+   + R
Sbjct: 20  SEIFCLVNFNHRESYFR 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,755
Number of Sequences: 336
Number of extensions: 1576
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)