Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1407
         (644 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.2  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   2.7  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   3.6  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   3.6  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   3.6  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   3.6  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   8.3  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 101 NSSRTSRRRLQATL 60
           NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 410 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 315
           R+R  +   TP+    +++PKL+ + A  P+L
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 362 LALRTGACRVWTGSGCGRCRVWSM 433
           +++  G   V  G+ C  C VWSM
Sbjct: 5   ISVHVGQAGVQIGNPCWDCTVWSM 28


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 426 QTRHRPHPLPVQTRHAPVLRANPYSEVT 343
           Q  H PH    Q +H P   + P++ V+
Sbjct: 72  QLHHSPHQYHQQVQHQPQPPSTPFANVS 99


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 426 QTRHRPHPLPVQTRHAPVLRANPYSEVT 343
           Q  H PH    Q +H P   + P++ V+
Sbjct: 73  QLHHSPHQYHQQVQHQPQPPSTPFANVS 100


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 275 CCGYGYERRDISTYIPHLNFQGPQRVSGH 189
           C   G++ RD S+Y+      GP R+ GH
Sbjct: 503 CGSEGHKARDCSSYVKCAACGGPHRI-GH 530


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -3

Query: 231 PSPEFSRSAESIRTPPQMRCSSRSEPY 151
           P P  + + E    PP++ C+   E Y
Sbjct: 39  PEPSTTEATEEESPPPKIECTDPREVY 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,311
Number of Sequences: 2352
Number of extensions: 15333
Number of successful extensions: 36
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)