Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1407
(644 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101271-1|AAI01272.1| 441|Homo sapiens TUBB8 protein protein. 32 1.5
BC101270-1|AAI01271.1| 441|Homo sapiens TUBB8 protein protein. 32 1.5
AL713922-4|CAI16221.1| 435|Homo sapiens novel protein similar t... 32 1.5
AL713922-3|CAI16220.1| 410|Homo sapiens novel protein similar t... 32 1.5
AF355127-1|AAL32434.1| 444|Homo sapiens beta-tubulin 4Q protein. 32 1.5
BC093754-1|AAH93754.1| 587|Homo sapiens hypothetical protein LO... 31 4.6
BC093752-1|AAH93752.1| 587|Homo sapiens hypothetical protein LO... 31 4.6
AF131737-1|AAD20026.1| 587|Homo sapiens Unknown protein. 31 4.6
AC079353-1|AAY24034.1| 423|Homo sapiens unknown protein. 31 4.6
U83668-1|AAB48456.1| 433|Homo sapiens beta-tubulin protein. 30 6.1
U83110-1|AAB41497.1| 434|Homo sapiens beta-tubulin protein. 30 6.1
>BC101271-1|AAI01272.1| 441|Homo sapiens TUBB8 protein protein.
Length = 441
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 477 MRPQKLYIFNIHSRKSSYVSDWIRTRVLRPSADLPSR 587
MR +FNI + SSY +DW+ V D+P R
Sbjct: 320 MREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPR 356
>BC101270-1|AAI01271.1| 441|Homo sapiens TUBB8 protein protein.
Length = 441
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 477 MRPQKLYIFNIHSRKSSYVSDWIRTRVLRPSADLPSR 587
MR +FNI + SSY +DW+ V D+P R
Sbjct: 320 MREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPR 356
>AL713922-4|CAI16221.1| 435|Homo sapiens novel protein similar to
beta-tubulin 4Q (TUBB4Q)kinase) II gamma protein.
Length = 435
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 477 MRPQKLYIFNIHSRKSSYVSDWIRTRVLRPSADLPSR 587
MR +FNI + SSY +DW+ V D+P R
Sbjct: 323 MREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPR 359
>AL713922-3|CAI16220.1| 410|Homo sapiens novel protein similar to
beta-tubulin 4Q (TUBB4Q)kinase) II gamma protein.
Length = 410
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 477 MRPQKLYIFNIHSRKSSYVSDWIRTRVLRPSADLPSR 587
MR +FNI + SSY +DW+ V D+P R
Sbjct: 289 MREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPR 325
>AF355127-1|AAL32434.1| 444|Homo sapiens beta-tubulin 4Q protein.
Length = 444
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 477 MRPQKLYIFNIHSRKSSYVSDWIRTRVLRPSADLPSR 587
MR +FNI + SSY +DW+ V D+P R
Sbjct: 323 MREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPR 359
>BC093754-1|AAH93754.1| 587|Homo sapiens hypothetical protein
LOC51057 protein.
Length = 587
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 116 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 247
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>BC093752-1|AAH93752.1| 587|Homo sapiens hypothetical protein
LOC51057 protein.
Length = 587
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 116 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 247
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>AF131737-1|AAD20026.1| 587|Homo sapiens Unknown protein.
Length = 587
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 116 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 247
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>AC079353-1|AAY24034.1| 423|Homo sapiens unknown protein.
Length = 423
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 116 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 247
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>U83668-1|AAB48456.1| 433|Homo sapiens beta-tubulin protein.
Length = 433
Score = 30.3 bits (65), Expect = 6.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 477 MRPQKLYIFNIHSRKSSYVSDWIRTRVLRPSADLP 581
MR +FNI + SSY +DW+ + D+P
Sbjct: 322 MREVDEQMFNIQDKNSSYFADWLPNNIKTAVCDIP 356
>U83110-1|AAB41497.1| 434|Homo sapiens beta-tubulin protein.
Length = 434
Score = 30.3 bits (65), Expect = 6.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 477 MRPQKLYIFNIHSRKSSYVSDWIRTRVLRPSADLP 581
MR +FNI + SSY +DW+ + D+P
Sbjct: 323 MREVDEQMFNIQDKNSSYFADWLPNNIKTAVCDIP 357
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,988,678
Number of Sequences: 237096
Number of extensions: 2209258
Number of successful extensions: 6650
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6650
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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