Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1406
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    25   0.73 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.1  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   9.0  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   9.0  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +3

Query: 225 SHPQADKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTI 404
           +H    K+ N  L   VV+ E  LKS V  + +K +     LEL  ++ +    D  K  
Sbjct: 23  THKYTTKYDNIDLE-NVVKNERLLKSYVDCLLEKGRCSPDGLELKKNMPDAIETDCSKCS 81

Query: 405 KKQ 413
           +KQ
Sbjct: 82  EKQ 84


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 15/63 (23%), Positives = 28/63 (44%)
 Frame = -3

Query: 202 ADDAQPHDGTGRTQPSISVSAVPHLAASFGLLVGGSEFLSLVLKTAQLDFELVETAVQLG 23
           ADD    +  G    S++     HLA     + G  EF +L+    ++ F+L E   +  
Sbjct: 290 ADDISQEE-YGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRVPFDLFENKKRKN 348

Query: 22  DVR 14
           +++
Sbjct: 349 NIK 351


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 154 ISVSAVPHLAASFGLLVGGS 95
           + +SA P L  SFG+  GG+
Sbjct: 181 LRLSARPLLPPSFGIFPGGA 200


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 88  LSLVLKTAQLDFELVETAVQLGDVRAS 8
           L+L+    Q  FE++   +  GDV ++
Sbjct: 105 LNLIFLLIQTRFEMINNIITRGDVTST 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,932
Number of Sequences: 336
Number of extensions: 1925
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)