Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1406
(660 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 40 0.002
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 36 0.022
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 35 0.066
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 35 0.066
06_03_0297 + 19267491-19267677,19267799-19267843,19268466-192685... 33 0.20
07_03_0699 + 20772415-20773450,20789050-20789606,20790971-207915... 32 0.35
04_01_0308 + 4188726-4190351 31 0.61
12_02_1021 + 25364349-25364465,25367237-25367324,25367851-253680... 31 0.81
07_01_0325 + 2275922-2276013,2276467-2276500,2276810-2276932,227... 31 1.1
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 31 1.1
09_06_0346 + 22435164-22435491,22435990-22436114,22436402-224365... 30 1.9
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389... 29 3.3
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 29 4.3
01_06_1773 - 39793167-39793490,39795176-39795643 29 4.3
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 29 4.3
07_01_0348 - 2517072-2517323,2517963-2518160 28 5.7
06_03_1306 + 29208882-29209547,29209641-29209854,29209947-292100... 28 5.7
04_04_0056 + 22406872-22407258,22408405-22409310 28 5.7
02_02_0554 - 11434744-11435364,11435741-11436442 28 5.7
06_03_1167 + 28111923-28113218 28 7.6
01_06_0765 - 31808775-31809443,31809547-31809703,31809777-318098... 28 7.6
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = +3
Query: 255 EQLNARVVEAETKLKSEVTRIKKKLQIQIT---ELELSLDVANKTNIDLQKTIKKQSLQL 425
EQ N E E K+EV +IKK ++ Q + E+ L VA + +D Q+ I + Q+
Sbjct: 440 EQKNMLAKELEAS-KAEVEKIKKAMEGQASALHEMSAQLRVAQEKYLDKQEEIDRARAQV 498
Query: 426 TEIQTHYDEVQRQLQVTLDQYGVAQRRISHSPERLRRFVATTSRPYALSAQSSSNT 593
E+ + +V LD+ + + S ER+ + S + S N+
Sbjct: 499 EELNVSLQNTKESYEVMLDEANYEKVCLKKSVERMEAETKSASEEWQSKELSFVNS 554
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/67 (26%), Positives = 39/67 (58%)
Frame = +3
Query: 270 RVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYD 449
R+ E ET+++ E++ ++ L+ +TE E L A K ++DL++ +K + + + D
Sbjct: 798 RIAELETQVQ-ELSAAEQSLKSHLTEFESKLASAEKKSMDLEQELKDATEECNSSRLRVD 856
Query: 450 EVQRQLQ 470
E+ +L+
Sbjct: 857 ELSGELE 863
Score = 35.9 bits (79), Expect = 0.029
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 246 HRN--EQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSL 419
HR+ E L + ++ E +L S ++ K+ + + E+E+ L+ K + T++KQ
Sbjct: 305 HRSSEESLKEKTLKLENELSSAHEELQAKI-LNLQEMEIKLEEQAKEKQTWEATLEKQQE 363
Query: 420 QLTEIQTHYDE 452
Q+ +QT DE
Sbjct: 364 QILNLQTELDE 374
Score = 32.3 bits (70), Expect = 0.35
Identities = 24/125 (19%), Positives = 57/125 (45%)
Frame = +3
Query: 228 HPQADKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIK 407
H A+ +N +L A++ EA + + + +K L ++ LE ++ N +++ I
Sbjct: 1139 HATAES-KNAELEAQMHEALETIGKKDSEVKD-LNERLAALESEIESLTHVNEAMKQEIN 1196
Query: 408 KQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRISHSPERLRRFVATTSRPYALSAQSSS 587
+ +++ E+Q + + + ++ V ++ I H E R + S + SA+ +
Sbjct: 1197 AKLVKVDELQEKLSSISSEKEEVAEKVVVHEKTIEHLREEHSRGLELQSAAESRSAEIEN 1256
Query: 588 NTRNL 602
R +
Sbjct: 1257 ELREV 1261
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/84 (25%), Positives = 39/84 (46%)
Frame = +3
Query: 273 VVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDE 452
V+E + ++EVT +K+KL TE E + + N L+ + + E+Q +
Sbjct: 1261 VLETVAQKEAEVTDLKEKLVSLETENEKLVGI----NEALKGELDTKVAMFDELQEQFSS 1316
Query: 453 VQRQLQVTLDQYGVAQRRISHSPE 524
+ + ++ V +R ISH E
Sbjct: 1317 THAEKEEAAEKLAVHERTISHLTE 1340
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 34.7 bits (76), Expect = 0.066
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +3
Query: 291 KLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQ 470
+LK EVT +++K+QIQ+ ELE + A+ + LQ + +Q + + Q Q
Sbjct: 755 ELKKEVTSLERKIQIQVQELEQKREEADAMHAQLQDE-RSNHMQKEAALRALENLHSQSQ 813
Query: 471 VTLDQYGVAQRRISHSPERL 530
+ Q R + HS ++L
Sbjct: 814 EEVKQMA---RDVEHSNKKL 830
Score = 31.1 bits (67), Expect = 0.81
Identities = 23/102 (22%), Positives = 45/102 (44%)
Frame = +3
Query: 291 KLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQ 470
+LK EVT ++ K+QIQ ELE + A+ + LQ + +Q + + Q Q
Sbjct: 681 ELKKEVTSLELKIQIQAQELEQKREEADTVHAQLQDE-RSNHMQKEAALHALENLHSQSQ 739
Query: 471 VTLDQYGVAQRRISHSPERLRRFVATTSRPYALSAQSSSNTR 596
+ + + + + ++ L++ V + R + Q R
Sbjct: 740 ---EDFNLVKLNLENTVCELKKEVTSLERKIQIQVQELEQKR 778
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 291 KLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQ 395
+LK EVT ++ K+QI + ELE + A+ + LQ
Sbjct: 607 ELKKEVTSLEVKIQILVQELEQKREEADVMHAQLQ 641
>03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 34.7 bits (76), Expect = 0.066
Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Frame = +3
Query: 204 REGRRNRSHPQAD----KHRNEQLNARV---VEAETKLKSEVTRIKK-KLQIQ--ITELE 353
+E +R S Q D + N +L + V +E + L++++ +K+ KL++ +T+ E
Sbjct: 841 QEAQRKLSEAQDDSEVLRRSNSKLQSTVESLIEECSSLQNQIAELKRQKLELHGHLTQQE 900
Query: 354 LSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLD 482
LD + K N+D KT++ +L+ +Q ++ L L+
Sbjct: 901 QELDNSKKRNLDFCKTVEFLEAKLSSLQKDISSKEQSLLSELE 943
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/79 (27%), Positives = 39/79 (49%)
Frame = +3
Query: 249 RNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLT 428
++E++ A E KL + + KL+ ELEL L + + + I LQ+
Sbjct: 1057 QSEEMLAADAEHMKKLMEDAKSNEDKLRKSSGELELKLKANDYEKQQMIEEISGLKLQVQ 1116
Query: 429 EIQTHYDEVQRQLQVTLDQ 485
+I + DEV + L+ +LD+
Sbjct: 1117 KIMSLQDEVLK-LKSSLDE 1134
>06_03_0297 +
19267491-19267677,19267799-19267843,19268466-19268542,
19268652-19268774,19269029-19269133,19269217-19269289,
19269588-19269690,19269890-19270144,19270996-19271125,
19271278-19271352,19271470-19271550
Length = 417
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = -2
Query: 380 GLVGHIKREFQFSNLDL----QLLLDAC-DFRLQFSLGFHDASVQLFI 252
G++ I R N+D+ QL++D C DF Q S+GF D VQL +
Sbjct: 154 GVLREIARHASVENIDICEIDQLVIDVCKDFFPQLSVGFKDPRVQLHV 201
>07_03_0699 +
20772415-20773450,20789050-20789606,20790971-20791567,
20792258-20792413
Length = 781
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = -3
Query: 289 VSASTTRAFSCSFRCLSACGWLRFLLPSLADDA-QPHDGTGR-TQPSISVSAVPHLAASF 116
+S S R++ RC++AC W A DA PH GR P ++ P
Sbjct: 105 LSLSPRRSYGYLKRCIAACSWSSMARWCQARDAPAPHPARGRGVHPRQPIAVAPAARHGA 164
Query: 115 GLLVG 101
G L+G
Sbjct: 165 GCLLG 169
>04_01_0308 + 4188726-4190351
Length = 541
Score = 31.5 bits (68), Expect = 0.61
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +3
Query: 243 KHRNEQLNARVVEAETK---LKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQ 413
K N +L + + E K ++E+ R+K +L E++ N N ++ K ++
Sbjct: 123 KTENNKLQSEALIVEKKQIMFEAEIKRLKMELGAVTEAKEVAAKAFNAQNEEITKKLEDL 182
Query: 414 SLQLTEIQTHYDEVQ 458
+L EIQT+ D V+
Sbjct: 183 KRKLEEIQTNKDLVE 197
>12_02_1021 +
25364349-25364465,25367237-25367324,25367851-25368004,
25368196-25368271,25368350-25368475,25369400-25369744
Length = 301
Score = 31.1 bits (67), Expect = 0.81
Identities = 21/112 (18%), Positives = 45/112 (40%)
Frame = +3
Query: 255 EQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEI 434
+ +NA+ + R +K+ Q + +LE + N LQK + + + +
Sbjct: 111 DPVNAKRTRRMLSNRESARRSRKRKQAHLNDLESQVSQLRSENASLQKRLSDMTQKYKQS 170
Query: 435 QTHYDEVQRQLQVTLDQYGVAQRRISHSPERLRRFVATTSRPYALSAQSSSN 590
T Y +Q D +R+++ + E +RR + + S +S+
Sbjct: 171 TTEYGNLQ-------DDMNAMRRKVNIAEEAVRRVTGIGLQLFTTSEMPASS 215
>07_01_0325 +
2275922-2276013,2276467-2276500,2276810-2276932,
2277334-2277401,2277494-2277585,2278662-2278987,
2280771-2281142
Length = 368
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/63 (22%), Positives = 25/63 (39%)
Frame = -3
Query: 460 LWTXXXXXXXXXSCRDCFLMVFWRSMLVLLATSRESSSSVIWICNFFLMRVTSDFNLVSA 281
LW C L++ W ++ + T +E + +W C F ++R + L A
Sbjct: 183 LWPPYASCVGSVVCHGSPLVLCWATLKIEYQTEQERHGARVWSCQFVIVRSCGHYVLPVA 242
Query: 280 STT 272
T
Sbjct: 243 KVT 245
>03_05_1124 + 30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +3
Query: 222 RSHPQADKHR-NEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQK 398
R+ ++HR + A ++ E + + K KL+ ++ EL LDV IDL++
Sbjct: 1103 RAMAACNEHRFRRETKASIIIQEARETGALKEAKDKLEKRVEELTWRLDVEKHLRIDLEE 1162
Query: 399 TIKKQSLQLTEIQTHYDEVQRQL 467
+ +++ +++ E+Q +L
Sbjct: 1163 A---KGQEISNLKSVLQEMQEKL 1182
>09_06_0346 +
22435164-22435491,22435990-22436114,22436402-22436514,
22436919-22437023,22437147-22437531,22437645-22437776,
22437980-22438450,22438550-22439278,22439579-22439767
Length = 858
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +3
Query: 201 AREGRRNRSHP--QADKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVAN 374
A EGR+ +A K + N+ E + ++ +TR K L+ + ++ L AN
Sbjct: 379 ASEGRQKAEKELFEASKMFRARENSLCKE-KIAVEERLTREKVSLEKEHLQIYNELQKAN 437
Query: 375 KTNIDLQKTIKKQSLQLTEIQTHYDEVQRQ 464
+ ++L++ + + + E+QT E+QRQ
Sbjct: 438 EQIMELERKLMHANSLMEELQTVQGELQRQ 467
>06_03_0099 +
16633928-16638213,16638299-16638386,16638823-16638950,
16640008-16640278
Length = 1590
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = +3
Query: 300 SEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQL-QVT 476
+ +TR KK+ Q E +DV N T++D+ K ++ + ++ E + +
Sbjct: 678 THITRDKKRYVNQQVIHETDIDVQNVTHVDVSK-VRASDISVSRNSQKASETRSDMANSQ 736
Query: 477 LDQYGVAQRRISHSPERLRRFVATTSRPYALSAQSSSNT 593
L+Q + + P+ A +R Y+ SA NT
Sbjct: 737 LEQIHASNSSMVRGPQSYLE-AALHNRVYSTSATDIVNT 774
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +3
Query: 201 AREGRRNRSHPQADKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKT 380
AR+ ++ H + KH E L+ VE + R +K + ITE E S D ++
Sbjct: 365 ARKSKQKSKHKK--KHLPESLSDSKVEVGRDTRRHQKREHRKKKRNITESESSSD--SEV 420
Query: 381 NIDLQKTIKKQ-SLQLTEIQTHYDEVQRQLQVTLD 482
+ID +K K++ + ++ Y +++V D
Sbjct: 421 DIDTRKHPKREHRKKKRDVTESYSSSDSEVEVDRD 455
>01_06_1773 - 39793167-39793490,39795176-39795643
Length = 263
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = -3
Query: 355 SSSSVIWICNFFLMRVTSDFNLVSASTTRAFSCSFRCLSACGWLRFLLPSLADDAQPHDG 176
+SSS W+ ++ + + V+A+T A + L A G R LLP+ D + +G
Sbjct: 2 ASSSSWWVVMLLMVVAAAGWGGVAAAT--AAEAAHEVLRAHGLPRGLLPAGIADFRHDEG 59
Query: 175 TGRTQPSISVS 143
+GR + ++ S
Sbjct: 60 SGRFEAALGES 70
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 28.7 bits (61), Expect = 4.3
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = +3
Query: 267 ARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHY 446
A +VEA LK E+ + KKL+ EL N +L+ +K+ LQ+
Sbjct: 596 ASIVEARDNLKKELLDVFKKLESTSQELVDERKTVTTLNRELEALVKQ--LQMD------ 647
Query: 447 DEVQRQLQVTLDQYGVAQRRISHSPERL-RRFVATTSRPYALSAQSSSNTRNL 602
E ++ L+ LD+ + ++ S L + T SR L A+ ++ L
Sbjct: 648 SEARKALEADLDEATKSLDEMNRSALSLSKELEETNSRKDTLEAEKKMLSKAL 700
>07_01_0348 - 2517072-2517323,2517963-2518160
Length = 149
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -3
Query: 241 SACGWLRFLLPSL--ADDAQPHDGTGRTQPS-ISVSAVPHLA 125
S CG + + + A DA HDG G P+ + V A PH+A
Sbjct: 49 SICGLVNHMRDWIVSAMDAPAHDGVGEAAPNLVPVLAAPHVA 90
>06_03_1306 +
29208882-29209547,29209641-29209854,29209947-29210023,
29210132-29210171,29210254-29210323,29210419-29210488,
29210747-29210995,29212810-29214700,29215458-29215771
Length = 1196
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 399 TIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRISHSPERLRRFV 542
++KK++LQ+ E EVQ+QL L+ Q RI L+R +
Sbjct: 352 SVKKKNLQVAEALRMQMEVQKQLHEQLEVQRQLQLRIEEHARYLQRIL 399
>04_04_0056 + 22406872-22407258,22408405-22409310
Length = 430
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = -1
Query: 573 RLTRRACS*LPRISSTSPVSD*SCAGRLRTGRESPATASGPHRSGSGSQ*AAETA 409
R TR + ++S SP+S SCA T P TA +G G + A A
Sbjct: 11 RATRSSALVRAILASRSPLSSSSCAASPTTAAPVPGTAPRAAAAGDGDEGCAAAA 65
>02_02_0554 - 11434744-11435364,11435741-11436442
Length = 440
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/91 (20%), Positives = 42/91 (46%)
Frame = +3
Query: 195 SSAREGRRNRSHPQADKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVAN 374
+S +EG P K ++ +V A + + + K + + +L + +
Sbjct: 327 TSEKEGAAESLSPPPMKVKHHLTPPPIVRAPGQFQEDEV---KSPEPSVHKLAVQVKKLR 383
Query: 375 KTNIDLQKTIKKQSLQLTEIQTHYDEVQRQL 467
K NI+L+ + ++LTE++ ++D + R L
Sbjct: 384 KENIELRDRNAELGVELTELRNNFDTLSRGL 414
>06_03_1167 + 28111923-28113218
Length = 431
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +3
Query: 192 ASSAREGRRNRSHP--QADKHRNEQLNARVVE 281
+S A+E RR +S P D ++NE++ A+V+E
Sbjct: 329 SSGAQERRRKQSLPGSSGDANQNEEIRAKVIE 360
>01_06_0765 -
31808775-31809443,31809547-31809703,31809777-31809894,
31810170-31810308
Length = 360
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 219 NRSHPQADKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELE 353
+R P++ H ++ RV E ETKL +V KKL+ Q+ E
Sbjct: 128 DRHSPRSPLHEKKRAGTRVAELETKL-GKVQDELKKLREQLATAE 171
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,448,024
Number of Sequences: 37544
Number of extensions: 269403
Number of successful extensions: 1139
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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