Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1406
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    32   0.018
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    27   0.69 
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        26   0.92 
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          25   2.1  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   3.7  
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    24   3.7  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   4.9  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       23   8.5  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 31.9 bits (69), Expect = 0.018
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +3

Query: 375 KTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQ 470
           K   D+QK+ +++  QL  ++ HY+++QR+L+
Sbjct: 887 KNRNDVQKSFREKQDQLARMREHYEQIQRELK 918


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 26.6 bits (56), Expect = 0.69
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 548 YEQALRVKRSVEQQYEESQTRVNELTVI 631
           YE  L VKRS++ +  +S  R NE+TV+
Sbjct: 348 YEVILVVKRSMDIKESDSWWRRNEITVV 375


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 26.2 bits (55), Expect = 0.92
 Identities = 26/118 (22%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
 Frame = +3

Query: 207 EGRRN-RSHPQA---DKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVAN 374
           EG++N  S  QA   +KHR    + ++V+A  + ++ + + ++       E +    +  
Sbjct: 337 EGQQNIASFKQAIHVNKHRLRDNSHQLVDALERQRAALAQEERNQARAAEEKDRIASIKE 396

Query: 375 KTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRISHSPERLRRFVAT 548
           +     ++T +++ L+   +Q H DE++ Q Q   ++  + +R      ERLR    T
Sbjct: 397 R-----EQTEQQRQLRAARMQAHLDEIEWQRQREAEEAVLTRREYE---ERLRNIDVT 446


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +3

Query: 279 EAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDL-QKTIKKQSLQLTEIQ 437
           E   KLK EV +  KKL+ +   L  SLD  +K  I+  ++ +K  +  L+ ++
Sbjct: 31  EKYQKLKGEVEKQSKKLEKRKETLGESLDKNHKKKIERDEEKLKNNNRDLSLVK 84


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +3

Query: 345 ELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQY-GVAQRRISHSP 521
           +L+     A +++   Q+  ++QSLQ  ++     + QRQ Q +  Q    +QRR+ H+ 
Sbjct: 227 QLQNHQQTAQQSSQQQQQQQQQQSLQQQQLSQQQQQ-QRQRQPSSQQGDSSSQRRVRHAG 285

Query: 522 ER 527
            R
Sbjct: 286 RR 287


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
 Frame = +1

Query: 16  EHHRVEPPSPRARNRVAPS*ERARGTHC--RLQGGRSWPQGEEQRSQ 150
           +HH      P + N  A +  +  G HC  ++  G S+P      +Q
Sbjct: 94  QHHTASDSQPLSMNTSASTVTQQVGRHCDQQMMDGWSYPHSHYSHNQ 140


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +2

Query: 476 SRPVRSRPAQDQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTR 610
           +RPVR RP + +S     ++ +G   ++ + +RS + +Y     R
Sbjct: 518 TRPVRHRPTRRKSTKRGKKDDKGYDRRSGKEERSNDNRYTNGADR 562


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 288 TKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLT 428
           T+ K  V  + + + I++ E   S +  + TNI   KTI  +  Q T
Sbjct: 435 TEQKIHVDELVQHVSIRVDEGSSSENALSATNIVEAKTIDDEQEQFT 481


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,876
Number of Sequences: 2352
Number of extensions: 8744
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)