Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1406
(660 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05270.1 68416.m00575 expressed protein similar to endosome-a... 42 5e-04
At1g67230.1 68414.m07652 expressed protein 36 0.032
At5g53620.2 68418.m06662 expressed protein 35 0.055
At5g53620.1 68418.m06661 expressed protein 35 0.055
At3g05830.1 68416.m00654 expressed protein 34 0.073
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 33 0.22
At5g53020.1 68418.m06585 expressed protein 31 0.51
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 31 0.51
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 31 0.51
At5g58320.2 68418.m07301 kinase interacting protein-related low ... 31 0.90
At4g30830.1 68417.m04373 expressed protein weak similarity to M ... 31 0.90
At5g27330.1 68418.m03263 expressed protein 30 1.2
At3g45850.1 68416.m04962 kinesin motor protein-related kinesin-r... 30 1.2
At5g61150.2 68418.m07672 leo1-like family protein weak similarit... 29 2.1
At5g61150.1 68418.m07671 leo1-like family protein weak similarit... 29 2.1
At5g38880.1 68418.m04702 expressed protein 29 2.1
At4g26020.1 68417.m03747 expressed protein weak similarity to ca... 29 2.1
At3g44050.1 68416.m04718 kinesin motor protein-related KLP2 prot... 29 2.1
At5g12350.1 68418.m01453 zinc finger protein, putative / regulat... 29 2.7
At3g13040.2 68416.m01625 myb family transcription factor contain... 29 2.7
At3g13040.1 68416.m01624 myb family transcription factor contain... 29 2.7
At2g22610.1 68415.m02680 kinesin motor protein-related 29 2.7
At1g75930.1 68414.m08819 family II extracellular lipase 6 (EXL6)... 29 2.7
At5g51280.1 68418.m06357 DEAD-box protein abstrakt, putative 29 3.6
At4g40020.1 68417.m05666 hypothetical protein 29 3.6
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 29 3.6
At2g18630.1 68415.m02169 expressed protein unusual splice site a... 29 3.6
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m... 29 3.6
At5g26770.2 68418.m03191 expressed protein 28 4.8
At5g26770.1 68418.m03190 expressed protein 28 4.8
At3g23980.1 68416.m03012 dentin sialophosphoprotein-related cont... 28 4.8
At1g48610.1 68414.m05437 AT hook motif-containing protein contai... 28 4.8
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 28 6.3
At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identica... 27 8.4
At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identica... 27 8.4
At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identica... 27 8.4
At1g44880.1 68414.m05142 Ulp1 protease family protein similar to... 27 8.4
At1g03830.1 68414.m00364 guanylate-binding family protein contai... 27 8.4
>At3g05270.1 68416.m00575 expressed protein similar to
endosome-associated protein (EEA1) (GI:1016368) [Homo
sapiens]; similar to smooth muscle myosin heavy chain
(GI:4417214) [Homo sapiens; contains Pfam profile
PF05911: Plant protein of unknown function (DUF869)
Length = 615
Score = 41.5 bits (93), Expect = 5e-04
Identities = 33/97 (34%), Positives = 55/97 (56%)
Frame = +3
Query: 243 KHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQ 422
K + E L +R+ E E KL SE+ KKL+ + ELEL L + K DLQ+ + K +
Sbjct: 380 KEQIEALQSRLKEIEGKL-SEM----KKLEAENQELELLLGESGKQMEDLQRQLNKAQVN 434
Query: 423 LTEIQTHYDEVQRQLQVTLDQYGVAQRRISHSPERLR 533
L+E++T E +L++T+ G ++++ S RL+
Sbjct: 435 LSELETRRAE---KLELTMCLNG-TKKQLETSQNRLK 467
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 35.5 bits (78), Expect = 0.032
Identities = 22/107 (20%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Frame = +3
Query: 279 EAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQ---KTIKKQSLQLTEIQTHYD 449
E E +L+++ +++ + +++ + DVA + +D+Q + I+K+ L++ + H +
Sbjct: 628 EKERELQAKKKLFEEEREKELSNINYLRDVARREMMDMQNERQRIEKEKLEVDSSKNHLE 687
Query: 450 EVQRQLQVTLDQYGVAQRRISHSPERLRRFVATTSRPYALSAQSSSN 590
E Q +++ +D +++ E+ +F++ SR + S +S+ N
Sbjct: 688 EQQTEIRKDVDDLVALTKKLK---EQREQFISERSR-FLSSMESNRN 730
>At5g53620.2 68418.m06662 expressed protein
Length = 682
Score = 34.7 bits (76), Expect = 0.055
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 420 QLTEIQTHYDEVQRQLQVTLDQYGVAQRRISHSPERLRRFVATTSRPYALSAQSSSNTRN 599
+++E+Q H E + QL +Q +AQ I + E+LR +R + A SS +
Sbjct: 194 KISELQEHIQEKESQLSELQEQNRIAQETILYKDEQLREAQGWIARAQEIDALQSSTNHS 253
Query: 600 LR 605
L+
Sbjct: 254 LQ 255
>At5g53620.1 68418.m06661 expressed protein
Length = 682
Score = 34.7 bits (76), Expect = 0.055
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 420 QLTEIQTHYDEVQRQLQVTLDQYGVAQRRISHSPERLRRFVATTSRPYALSAQSSSNTRN 599
+++E+Q H E + QL +Q +AQ I + E+LR +R + A SS +
Sbjct: 194 KISELQEHIQEKESQLSELQEQNRIAQETILYKDEQLREAQGWIARAQEIDALQSSTNHS 253
Query: 600 LR 605
L+
Sbjct: 254 LQ 255
>At3g05830.1 68416.m00654 expressed protein
Length = 336
Score = 34.3 bits (75), Expect = 0.073
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = +3
Query: 255 EQLNARVVEAE----TKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQ 422
E++N R+VE + TKLK E+ + + + + ELE L+ +T+ DL+K + K
Sbjct: 210 ERMN-RLVEVKDEEITKLKDEIRLMSGQWKHKTKELESQLEKQRRTDQDLKKKVLKLEFC 268
Query: 423 LTEIQTHYDEVQRQ 464
L E ++ ++QR+
Sbjct: 269 LQEARSQTRKLQRK 282
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 32.7 bits (71), Expect = 0.22
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +3
Query: 243 KHRNEQLNARVV--EA-ETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQ 413
KH E L A++ EA E+ LK ++++++ KL + TE +LSL A + L+ +K++
Sbjct: 436 KHEVETLEAKLECREAQESLLKEKLSKLEAKLAEEGTE-KLSLSKAMRKIKKLEINVKEK 494
Query: 414 SLQLTEIQTHYDEVQRQLQVTLD 482
+L + E RQL V +D
Sbjct: 495 EFELLSLGEGKREAIRQLCVLVD 517
>At5g53020.1 68418.m06585 expressed protein
Length = 721
Score = 31.5 bits (68), Expect = 0.51
Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Frame = +3
Query: 249 RNEQLNARVVEAETKLKSEVTRIKKKLQIQITELE-LSLDVANKTNIDLQK-------TI 404
R ++ + ++ +L++E++R K+++ + ELE LSL++ NK DL++ +
Sbjct: 163 RQKKTFLELASSQRQLEAELSRANKQIEAKGHELEDLSLEI-NKMRKDLEQKDRILAVMM 221
Query: 405 KKQSLQLTEIQ-THYDEV-QRQLQVTLDQYGVAQRRISHSPERLRRFVA--TTSRPYALS 572
KK L +TE Q T E ++Q + ++ + + H LR A TS+P S
Sbjct: 222 KKSKLDMTEKQMTLLKEAKKKQDEEEAKKWKMNPKSRKHERRSLRSMFAFEATSKPKTNS 281
Query: 573 AQSSSNTRNL 602
S ++ +L
Sbjct: 282 VGSITHIEHL 291
>At4g14760.1 68417.m02271 M protein repeat-containing protein contains
Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 31.5 bits (68), Expect = 0.51
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Frame = +2
Query: 503 QDQSLTGEVEEIRGNYEQALRVKRSVEQQYEE-------SQTRVNELTVINVNLSS 649
+++ L EVEE+R +YE + R++ ++E Q E + + +L +N NL S
Sbjct: 1144 ENEELHKEVEELRKDYEDSRRMRANLEWQISELSDVAGRQEEEIRKLNALNENLES 1199
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 31.5 bits (68), Expect = 0.51
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = +3
Query: 234 QADKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIK-- 407
Q +K+R ++L +V E K E K Q+ EL+ +L+ + L+ +
Sbjct: 79 QTEKYRIQELEEQVSSLEKK-HGETEADSKGYLGQVAELQSTLEAFQVKSSSLEAALNIA 137
Query: 408 -KQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRISHSPERLRRFVATT 551
+ +LTE +++L+ T+D+Y V + E +R + T
Sbjct: 138 TENEKELTENLNAVTSEKKKLEATVDEYSVKISESENLLESIRNELNVT 186
>At5g58320.2 68418.m07301 kinase interacting protein-related low
similarity to kinase interacting protein 1 [Petunia
integrifolia] GI:13936326
Length = 558
Score = 30.7 bits (66), Expect = 0.90
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Frame = +3
Query: 258 QLNARVVEAETKLKSEV-----------------TRIKKKLQIQITELELSLDVANKTNI 386
++N +E E KLKSE+ +R +L+ +I+ L + + +
Sbjct: 440 KVNNEKIEEEEKLKSEIEVLTLEKVEKGRCIETLSRKVSELESEISRLGSEIKARDDRTM 499
Query: 387 DLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLD 482
+++K ++KQ +L E+ EV RQL +LD
Sbjct: 500 EMEKEVEKQRRELEEVAEEKREVIRQLCFSLD 531
>At4g30830.1 68417.m04373 expressed protein weak similarity to M
protein type 1 [Streptococcus pyogenes] GI:311758;
contains Pfam profile PF04576: Protein of unknown
function, DUF593
Length = 363
Score = 30.7 bits (66), Expect = 0.90
Identities = 16/67 (23%), Positives = 39/67 (58%)
Frame = +3
Query: 204 REGRRNRSHPQADKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTN 383
R G+RNR+ QA+ R Q R+ ++ + E + + K+ +I + + E+ ++++ +
Sbjct: 272 RSGKRNRAEYQAELQRLRQRVERLERGKSNTEPETSGVIKQEEISLLK-EVKEELSSVQS 330
Query: 384 IDLQKTI 404
D++K++
Sbjct: 331 SDVKKSL 337
>At5g27330.1 68418.m03263 expressed protein
Length = 628
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = +3
Query: 210 GRRNRSH---PQADKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKT 380
G R RS +K R + R +E K K EV +++ + I ELE L N+
Sbjct: 233 GNRERSELVESLEEKVREIDVLKREIEGVVKEKMEVEMVRRDQREMIVELEKKLGDMNEI 292
Query: 381 NIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQ 485
L K + Q+ ++ DEV + + +Q
Sbjct: 293 VESLTKEREGLRGQVVGLEKSLDEVTEEAKARAEQ 327
>At3g45850.1 68416.m04962 kinesin motor protein-related
kinesin-related protein TKRP125, Nicotiana tabacum,
PIR:T02017
Length = 1058
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 318 KKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVT 476
KK + +I LEL + +K +DLQ+ Q + E+ ++ +++L+ T
Sbjct: 443 KKAMAEKIERLELQSESKDKRVVDLQELYNSQQILTAELSEKLEKTEKKLEET 495
>At5g61150.2 68418.m07672 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 623
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +3
Query: 231 PQADKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELS 359
P+ +K + E+ ++ ++A TKL +IK+K + + +LS
Sbjct: 414 PEREKEKREKAESQNLKASTKLSQAREKIKRKYPLPVERRQLS 456
>At5g61150.1 68418.m07671 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 625
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +3
Query: 231 PQADKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELS 359
P+ +K + E+ ++ ++A TKL +IK+K + + +LS
Sbjct: 414 PEREKEKREKAESQNLKASTKLSQAREKIKRKYPLPVERRQLS 456
>At5g38880.1 68418.m04702 expressed protein
Length = 796
Score = 29.5 bits (63), Expect = 2.1
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Frame = +3
Query: 249 RNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIK-KQSL-- 419
+ +L A+ VE +L++ V R +K L+ ++ E+ + K +D + + KQ+L
Sbjct: 125 QERELAAKEVE---RLRNIVRRQRKDLKARMLEVSRE-EAERKRMLDERANYRHKQALLE 180
Query: 420 ----QLTEIQTHYDEVQRQLQVTLDQYGVAQRRISHSPERLRRFVATTSR 557
Q E + E ++LQV ++Q AQR ++ S E L A + R
Sbjct: 181 AYDQQCDEATRIFAEYHKRLQVYVNQANDAQRSVNSSNEVLSSLSANSER 230
>At4g26020.1 68417.m03747 expressed protein weak similarity to
cardiac muscle factor 1 [Gallus gallus] GI:14422164
Length = 247
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/88 (21%), Positives = 41/88 (46%)
Frame = +3
Query: 240 DKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSL 419
+K N+ + R+ + T KS + + KKL +TE+E ++ + DL+ + +
Sbjct: 131 EKATNDMVIDRLRQDLTANKSHIQAMSKKLDRVVTEVECKYELEIQ---DLKDCLLMEQA 187
Query: 420 QLTEIQTHYDEVQRQLQVTLDQYGVAQR 503
+ +I +Q++L ++ QR
Sbjct: 188 EKNDISNKLQSLQKELLISRTSIAEKQR 215
>At3g44050.1 68416.m04718 kinesin motor protein-related KLP2 protein,
Xenopus laevis, PIR:T30335
Length = 1229
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/95 (21%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +3
Query: 186 G*ASSAREGRRNRSHPQADKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLD 365
G A+ + + ++ Q++ + + A V + + + +++K+++ TE+E S
Sbjct: 1054 GKATDLLKSQEEKTKLQSEMKLSREKLASVRKEVDDMTKKSLKLEKEIKTMETEIEKSSK 1113
Query: 366 VANKTNIDLQKTI-KKQSLQLTEIQTHYDEVQRQL 467
++ ++L+ TI +KQ++Q E Q E+Q +
Sbjct: 1114 TRTESEMELENTIQEKQTIQEMEEQ-GMSEIQNMI 1147
>At5g12350.1 68418.m01453 zinc finger protein, putative / regulator of
chromosome condensation (RCC1) family protein similar to
zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1062
Score = 29.1 bits (62), Expect = 2.7
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Frame = +3
Query: 243 KHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQ 422
K N+ L+ VV KL+S+V + +K Q+Q ELE +T L++ + + +
Sbjct: 851 KRTNDNLSQEVV----KLRSQVESLTRKAQLQEVELE-------RTTKQLKEALAITNEE 899
Query: 423 LTEIQTHYDEVQ---RQLQVTLDQYGVAQRRISHSPERLRRFVATTSR--PYALSAQSSS 587
T + + ++ QL+ ++ V R SP L F ++ R P+ + Q++S
Sbjct: 900 TTRCKAAKEVIKSLTAQLKDMAERLPVGSARTVKSPPSLNSFGSSPGRIDPFNILNQANS 959
>At3g13040.2 68416.m01625 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 449
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 405 KKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRISHSPERLRRFV 542
KK ++QLTE EVQ+QL L+ V Q RI + L + +
Sbjct: 327 KKGAIQLTEALRMQMEVQKQLHEQLEVQRVLQLRIEEHAKYLEKML 372
>At3g13040.1 68416.m01624 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 449
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 405 KKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRISHSPERLRRFV 542
KK ++QLTE EVQ+QL L+ V Q RI + L + +
Sbjct: 327 KKGAIQLTEALRMQMEVQKQLHEQLEVQRVLQLRIEEHAKYLEKML 372
>At2g22610.1 68415.m02680 kinesin motor protein-related
Length = 1093
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +2
Query: 479 RPVRSRPAQDQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNEL 622
R V PA+ Q TGE+++++ E+A + RS ++ ++ + + L
Sbjct: 747 RGVELGPARKQVDTGEIQKLKAMVEKARQESRSKDESIKKMEENIQNL 794
>At1g75930.1 68414.m08819 family II extracellular lipase 6 (EXL6)
EXL6 (PMID:11431566); similar to anter-specific
proline-rich protein (APG) SP:P40602 [Arabidopsis
thaliana]
Length = 343
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 373 LATSRESSSSVIWICNFFLMRVTSDFNL 290
L R S V CNF L R+T DFN+
Sbjct: 223 LPIHRASFGGVFGWCNFLLNRITEDFNM 250
>At5g51280.1 68418.m06357 DEAD-box protein abstrakt, putative
Length = 591
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +3
Query: 204 REGRRNRSHPQADKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANKTN 383
R+G+ + +ADK + + ++ T+LK +V + QI + E E+ +++K
Sbjct: 31 RKGKASELEEEADKEKLAEAKPSLLVQATQLKRDVPEVSATEQIILQEKEMMEHLSDKKT 90
Query: 384 I 386
+
Sbjct: 91 L 91
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 192 ASSAREGRRNRSHPQADKHRNEQLNARVVEAETKLKSEVTRIK-KKLQIQITELELSLDV 368
A AR N DK Q + +E K+ V KKL+ ++E+E++++
Sbjct: 316 AGIARAENSNLKDALLDKEEELQFALKEIE-RVKVNEAVANDNIKKLKKMLSEIEVAMEE 374
Query: 369 ANKTNIDLQKTIKKQSLQLTE 431
+ +++ Q+++ K+ +++ E
Sbjct: 375 EKQRSLNRQESMPKEVVEVVE 395
>At2g27170.1 68415.m06029 structural maintenance of chromosomes
(SMC) family protein similar to basement
membrane-associated chondroitin proteoglycan Bamacan
[Rattus norvegicus] GI:1785540; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain. No suitalble
start codon was identified.
Length = 1207
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/95 (20%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = +3
Query: 219 NRSHPQADKHRNEQLNARVVEAE-TKLKSEVTRIKKK---LQIQITELELSLDVANKTNI 386
N + + R + + +++ + T+L +E R++ ++Q+ +L+ + ANK
Sbjct: 681 NEKEKELEDVRRQLQDVSLIDQQITQLVTEQQRLEADWTLCKLQVEQLKQEIANANKQKH 740
Query: 387 DLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYG 491
+ K I+ + L +I+T D+V+ + + + G
Sbjct: 741 AIHKAIEYKEKLLGDIRTRIDQVRSSMSMKEAEMG 775
>At2g18630.1 68415.m02169 expressed protein unusual splice site at
second intron; GA instead of conserved GT at donor site;
similar to At14a GI:11994571 and GI:11994573
[Arabidopsis thaliana]
Length = 393
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/71 (22%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = +3
Query: 297 KSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLT---EIQTHYDEVQRQL 467
K +T I+ I + E++ + K ++++ +KK +T E++ DE++++L
Sbjct: 284 KEIITSIRIGTYISVKEMDNISILVRKVEVEIESLLKKAEFAITEEKEVRLAIDEIKKKL 343
Query: 468 QV---TLDQYG 491
V T+++ G
Sbjct: 344 DVFTETIEELG 354
>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
myosin heavy chain (GI:1408194) {Placopecten
magellanicus}; similar to Myosin heavy chain, clone 203
(Fragment) (SP:P39922){Hydra attenuata}; contains one
transmembrane domain
Length = 323
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 509 QSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNELTVI 631
+SLT E+EE+RG +A R +E++ ++S L I
Sbjct: 60 ESLTAEIEELRGAESKAKRKMGEMEREIDKSDEERKVLEAI 100
>At5g26770.2 68418.m03191 expressed protein
Length = 335
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 279 EAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQ 458
E KLK +V + +++ ELE L+ + + +L+K + K L E ++ ++Q
Sbjct: 220 EEIAKLKDDVKLMSAHWKLKTKELESQLERQRRADQELKKKVLKLEFCLQEARSQTRKLQ 279
Query: 459 R 461
R
Sbjct: 280 R 280
>At5g26770.1 68418.m03190 expressed protein
Length = 335
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 279 EAETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQ 458
E KLK +V + +++ ELE L+ + + +L+K + K L E ++ ++Q
Sbjct: 220 EEIAKLKDDVKLMSAHWKLKTKELESQLERQRRADQELKKKVLKLEFCLQEARSQTRKLQ 279
Query: 459 R 461
R
Sbjct: 280 R 280
>At3g23980.1 68416.m03012 dentin sialophosphoprotein-related
contains weak similarity to Dentin sialophosphoprotein
precursor (Swiss-Prot:Q9NZW4) [Homo sapiens]
Length = 736
Score = 28.3 bits (60), Expect = 4.8
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Frame = +3
Query: 237 ADKHRNEQLNARVVEAETK---LKSEVTRIKKKLQIQITEL---ELSLDVANKTNIDLQK 398
A R++ L + V+ E K L+S +++++L+ TE+ + L K DLQ
Sbjct: 445 AADERSQILASEVISLEDKALRLRSNELKLERELEKAQTEMLSYKKKLQSLEKDRQDLQS 504
Query: 399 TIKKQSLQLTEIQTHYDEVQRQLQVT-LDQYGVAQRRISHSPERLRRFVAT 548
TIK + +QT + + T L + +++ +S S E L + T
Sbjct: 505 TIKALQEEKKVLQTMVQKASSGGKSTDLSKNSTSRKNVSTSTEGLGNGLCT 555
>At1g48610.1 68414.m05437 AT hook motif-containing protein contains
Pfam profile PF02178: AT hook motif
Length = 212
Score = 28.3 bits (60), Expect = 4.8
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Frame = +3
Query: 207 EGRRNRSHPQADKHRNEQLNARVVEAETKLKSEVTRIKKKLQ-IQITELELSL------- 362
EG R R P+ D + A V A K + ++ Q ++ T S+
Sbjct: 115 EGSRKRGRPKKDDVAAATVPAETVVAPAKRRGRKPTVEVAAQPVRRTRKSTSVAPVAANV 174
Query: 363 -DVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQR 461
D+ +T + LQK +K+ + +L + T DEVQ+
Sbjct: 175 GDLKKRTAL-LQKKVKEAAAKLKQAVTAIDEVQK 207
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 1060
Score = 27.9 bits (59), Expect = 6.3
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Frame = +3
Query: 222 RSHPQADKHRNEQLN--ARVVEAETKLKSEVTRIKKKLQI----QITELELSLDVANKTN 383
RS A KH +QL+ R K E KKKL+ +IT+L+ N+
Sbjct: 498 RSVEDAMKHLKQQLDDSERYKLEYQKRYDESNNDKKKLEDIYRERITKLQGENSSLNERC 557
Query: 384 IDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRISHSPERLR-RFVATTSRP 560
L KT++ + ++ E +YD Q+ L Q V Q ++S E LR R + +R
Sbjct: 558 STLVKTVESKKEEIKEWIRNYD------QIVLKQKAV-QEQLSSEMEVLRTRSTTSEARV 610
Query: 561 YALSAQSSS 587
A Q+ S
Sbjct: 611 AAAREQAKS 619
>At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1150
Score = 27.5 bits (58), Expect = 8.4
Identities = 24/133 (18%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Frame = +3
Query: 198 SAREGRRNRSHPQADKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANK 377
S+ ++ +S Q + + +QL + + +++ S + + + Q Q+ + + + +
Sbjct: 512 SSLNHQQQQSQSQ-QQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQLLQQQQQQQLQQQ 570
Query: 378 TNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQV-TLDQYGVAQRRISHSPERLRRFVATTS 554
LQ+ ++Q L+ +Q+H +QLQ L Q V Q ++ + + ++ + +
Sbjct: 571 HQQPLQQQTQQQQLRTQPLQSHSHPQPQQLQQHKLQQLQVPQNQLYNGQQAAQQHQSQQA 630
Query: 555 RPYALSAQSSSNT 593
+ L Q S +
Sbjct: 631 STHHLQPQLVSGS 643
>At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1164
Score = 27.5 bits (58), Expect = 8.4
Identities = 24/133 (18%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Frame = +3
Query: 198 SAREGRRNRSHPQADKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANK 377
S+ ++ +S Q + + +QL + + +++ S + + + Q Q+ + + + +
Sbjct: 511 SSLNHQQQQSQSQ-QQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQLLQQQQQQQLQQQ 569
Query: 378 TNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQV-TLDQYGVAQRRISHSPERLRRFVATTS 554
LQ+ ++Q L+ +Q+H +QLQ L Q V Q ++ + + ++ + +
Sbjct: 570 HQQPLQQQTQQQQLRTQPLQSHSHPQPQQLQQHKLQQLQVPQNQLYNGQQAAQQHQSQQA 629
Query: 555 RPYALSAQSSSNT 593
+ L Q S +
Sbjct: 630 STHHLQPQLVSGS 642
>At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identical
to auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1165
Score = 27.5 bits (58), Expect = 8.4
Identities = 24/133 (18%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Frame = +3
Query: 198 SAREGRRNRSHPQADKHRNEQLNARVVEAETKLKSEVTRIKKKLQIQITELELSLDVANK 377
S+ ++ +S Q + + +QL + + +++ S + + + Q Q+ + + + +
Sbjct: 512 SSLNHQQQQSQSQ-QQQQQQQLLQQQQQLQSQQHSNNNQSQSQQQQQLLQQQQQQQLQQQ 570
Query: 378 TNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQV-TLDQYGVAQRRISHSPERLRRFVATTS 554
LQ+ ++Q L+ +Q+H +QLQ L Q V Q ++ + + ++ + +
Sbjct: 571 HQQPLQQQTQQQQLRTQPLQSHSHPQPQQLQQHKLQQLQVPQNQLYNGQQAAQQHQSQQA 630
Query: 555 RPYALSAQSSSNT 593
+ L Q S +
Sbjct: 631 STHHLQPQLVSGS 643
>At1g44880.1 68414.m05142 Ulp1 protease family protein similar to
At5g28170, At1g35110, At3g42530, At4g19320, At5g36020,
At4g03970, At3g43010, At2g10350; contains Pfam profile
PF02902: Ulp1 protease family, C-terminal catalytic
domain
Length = 1038
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/88 (23%), Positives = 44/88 (50%)
Frame = +3
Query: 297 KSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVT 476
K + KKKL ++ + + ++ +L + ++S ++E+QT +E+ ++ +
Sbjct: 388 KKHIVDRKKKLGVKSVAPKSKRRYSTRSKPELNLSDDEKSRLISELQTKVEELSNRV-MK 446
Query: 477 LDQYGVAQRRISHSPERLRRFVATTSRP 560
L++ A R S + FVA +SRP
Sbjct: 447 LEKAKKAV-RFKRSTKLSSSFVACSSRP 473
>At1g03830.1 68414.m00364 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 991
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/68 (22%), Positives = 34/68 (50%)
Frame = +3
Query: 285 ETKLKSEVTRIKKKLQIQITELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQ 464
E L++E +R+ + + ITE L + + +KK +L++ E + +V+ Q
Sbjct: 554 EDGLRAEFSRVLDEKEKIITEKAAKLATLEQQLASTRAELKKSALKVDECSSEAKDVRLQ 613
Query: 465 LQVTLDQY 488
+ + ++Y
Sbjct: 614 MSLLNEKY 621
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,984,233
Number of Sequences: 28952
Number of extensions: 191981
Number of successful extensions: 849
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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