Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1402
         (736 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75621-1|CAA53287.1| 1807|Homo sapiens tuberin protein.                31   4.3  
L48546-1|AAB41564.1| 1807|Homo sapiens tuberin protein.                31   4.3  
BC150300-1|AAI50301.1| 1784|Homo sapiens TSC2 protein protein.         31   4.3  
AC005600-3|AAC34210.1| 1784|Homo sapiens tuberin protein.              31   4.3  
AB210000-1|BAE06082.1| 1775|Homo sapiens SLC9A3R2 variant protei...    31   4.3  

>X75621-1|CAA53287.1| 1807|Homo sapiens tuberin protein.
          Length = 1807

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 160 LGQKCVNQRPSESLLNLMKYNNNFFKPVRN 249
           L ++C +QRP  SLLNL+ Y      P ++
Sbjct: 410 LVERCADQRPESSLLNLISYRAQSIHPAKD 439


>L48546-1|AAB41564.1| 1807|Homo sapiens tuberin protein.
          Length = 1807

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 160 LGQKCVNQRPSESLLNLMKYNNNFFKPVRN 249
           L ++C +QRP  SLLNL+ Y      P ++
Sbjct: 410 LVERCADQRPESSLLNLISYRAQSIHPAKD 439


>BC150300-1|AAI50301.1| 1784|Homo sapiens TSC2 protein protein.
          Length = 1784

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 160 LGQKCVNQRPSESLLNLMKYNNNFFKPVRN 249
           L ++C +QRP  SLLNL+ Y      P ++
Sbjct: 410 LVERCADQRPESSLLNLISYRAQSIHPAKD 439


>AC005600-3|AAC34210.1| 1784|Homo sapiens tuberin protein.
          Length = 1784

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 160 LGQKCVNQRPSESLLNLMKYNNNFFKPVRN 249
           L ++C +QRP  SLLNL+ Y      P ++
Sbjct: 410 LVERCADQRPESSLLNLISYRAQSIHPAKD 439


>AB210000-1|BAE06082.1| 1775|Homo sapiens SLC9A3R2 variant protein
           protein.
          Length = 1775

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 160 LGQKCVNQRPSESLLNLMKYNNNFFKPVRN 249
           L ++C +QRP  SLLNL+ Y      P ++
Sbjct: 445 LVERCADQRPESSLLNLISYRAQSIHPAKD 474


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,156,203
Number of Sequences: 237096
Number of extensions: 1786452
Number of successful extensions: 2262
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2262
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)