Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1402
         (736 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003648-1|AAO39652.1|  938|Drosophila melanogaster AT11044p pro...    30   3.8  
AE014298-3177|AAN09566.1|  938|Drosophila melanogaster CG14619-P...    30   3.8  

>BT003648-1|AAO39652.1|  938|Drosophila melanogaster AT11044p
           protein.
          Length = 938

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = -3

Query: 563 RIIIITNSKMTKMLKRTRSLFKLHIVLSTVEVNLRLQEFYREKNKHANNNYSTSQ 399
           R  ++++ K    LK    L   H+  S V+  L+     R      NNNY+TS+
Sbjct: 63  RFFLVSSYKDPTFLKAECDLAHAHVTTSKVKTTLQPHRRSRAGEDSRNNNYNTSR 117


>AE014298-3177|AAN09566.1|  938|Drosophila melanogaster CG14619-PC,
           isoform C protein.
          Length = 938

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = -3

Query: 563 RIIIITNSKMTKMLKRTRSLFKLHIVLSTVEVNLRLQEFYREKNKHANNNYSTSQ 399
           R  ++++ K    LK    L   H+  S V+  L+     R      NNNY+TS+
Sbjct: 63  RFFLVSSYKDPTFLKAECDLAHAHVTTSKVKTTLQPHRRSRAGEDSRNNNYNTSR 117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,937,204
Number of Sequences: 53049
Number of extensions: 578102
Number of successful extensions: 1075
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)