Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1402
         (736 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.56 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.56 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    24   1.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   2.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   3.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   5.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   5.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = -3

Query: 473 EVNLRLQEFYREKNKHANNNYSTSQI*CILIGFIHPIENAVLARQCEKPGRPL 315
           +V L   + Y  +N  +NNN  T     +    I  ++  VL R CEK  + L
Sbjct: 369 DVLLSNNDVYLYQNTMSNNNQRTEWSATVKAA-ISEVQRVVLGRLCEKVAKQL 420


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = -3

Query: 473 EVNLRLQEFYREKNKHANNNYSTSQI*CILIGFIHPIENAVLARQCEKPGRPL 315
           +V L   + Y  +N  +NNN  T     +    I  ++  VL R CEK  + L
Sbjct: 407 DVLLSNNDVYLYQNTMSNNNQRTEWSATVKAA-ISEVQRVVLGRLCEKVAKQL 458


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -1

Query: 661 IFFFAQNKIAIKVLAIC--TLDLPHVRNVRCIYVFG 560
           +FFFA   + + V  +C  T  + H R+  C++V G
Sbjct: 149 MFFFAATSLLV-VAEVCYFTAHVTHPRHRLCVFVAG 183


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 365 IENAVLARQCEKPGRPLCHH 306
           I N+++  Q   PG PL H+
Sbjct: 173 IPNSIILDQYTNPGNPLAHY 192


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 518 RTRSLFKLHIVLSTVEVNLRLQEFYRE 438
           R  ++ KL IVLST+  N R++   +E
Sbjct: 491 RKYAMLKLKIVLSTILRNFRVRSDVKE 517


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 109 VEICFFRPAKSYQQGNSLGQKCVNQRPSESLLNLMKY 219
           + I  F+P K+ ++  ++G K   Q  S    ++ KY
Sbjct: 760 IYIILFQPDKNIRRKVTMGDKSKKQGSSAGTSSITKY 796


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 109 VEICFFRPAKSYQQGNSLGQKCVNQRPSESLLNLMKY 219
           + I  F+P K+ ++  ++G K   Q  S    ++ KY
Sbjct: 850 IYIILFQPDKNIRRKVTMGDKSKKQGSSAGTSSITKY 886


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,186
Number of Sequences: 438
Number of extensions: 3966
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)