Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1400
(758 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 24 1.5
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 24 1.5
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 24 1.5
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 2.6
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 2.6
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 23 3.5
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 23 3.5
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 3.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.6
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 22 6.1
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 22 6.1
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 21 8.1
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 170 AQKGLGVSRLEPPSVQILVVVANTP 244
A KG G ++ PP+ ++V +N P
Sbjct: 49 APKGFGGVQISPPNENLVVTSSNRP 73
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 170 AQKGLGVSRLEPPSVQILVVVANTP 244
A KG G ++ PP+ ++V +N P
Sbjct: 50 APKGFGGVQISPPNENLVVTSSNRP 74
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 170 AQKGLGVSRLEPPSVQILVVVANTP 244
A KG G ++ PP+ ++V +N P
Sbjct: 50 APKGFGGVQISPPNENLVVTSSNRP 74
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.0 bits (47), Expect = 2.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 652 NFQGPQRVSGHRRKC 608
NF GP R++ R+C
Sbjct: 601 NFHGPHRLAARSRRC 615
Score = 21.4 bits (43), Expect = 8.1
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +1
Query: 307 VDPKLKERSYVDVACFFIIFKNNEK*RPLSERESGSYSGTRQRNRFNNRSLVFKNECST 483
V+PKL + + + KNN++ LS+ + + + + R + KNE T
Sbjct: 284 VEPKLNKHEDLPQDLSMKLSKNNDQCLDLSKTKETNLEKSNLNHNEQLRKYLCKNEDET 342
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.0 bits (47), Expect = 2.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 652 NFQGPQRVSGHRRKC 608
NF GP R++ R+C
Sbjct: 493 NFHGPHRLAARSRRC 507
Score = 21.4 bits (43), Expect = 8.1
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +1
Query: 307 VDPKLKERSYVDVACFFIIFKNNEK*RPLSERESGSYSGTRQRNRFNNRSLVFKNECST 483
V+PKL + + + KNN++ LS+ + + + + R + KNE T
Sbjct: 176 VEPKLNKHEDLPQDLSMKLSKNNDQCLDLSKTKETNLEKSNLNHNEQLRKYLCKNEDET 234
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 570 RIPWNSNAQAEKKTLPGPLG 511
+IPW+ NA+A K G G
Sbjct: 330 QIPWDKNAEALAKWANGQTG 349
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -2
Query: 265 RQSSGPRWSICYYHQDLHRRRLQAAHAQTLLRSPSRTSYS 146
R+ PR ICYYH L + A Q + + T +S
Sbjct: 113 REGEPPR--ICYYHFTLELYTVLGAACQVCTPNATNTVWS 150
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -2
Query: 265 RQSSGPRWSICYYHQDLHRRRLQAAHAQTLLRSPSRTSYS 146
R+ PR ICYYH L + A Q + + T +S
Sbjct: 113 REGEPPR--ICYYHFTLELYTVLGAACQVCTPNATNTVWS 150
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.6
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 422 EPGSGTVSIIVPSSLKTSVRRGNPKWPEDPPRGPGRVFF 538
E S TVS VP + + + NP W EDP G V F
Sbjct: 1192 ETDSETVST-VPQNKRDDLV--NPYWIEDPDVRKGEVEF 1227
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.6
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 422 EPGSGTVSIIVPSSLKTSVRRGNPKWPEDPPRGPGRVFF 538
E S TVS VP + + + NP W EDP G V F
Sbjct: 1192 ETDSETVST-VPQNKRDDLV--NPYWIEDPDVRKGEVEF 1227
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.6
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 422 EPGSGTVSIIVPSSLKTSVRRGNPKWPEDPPRGPGRVFF 538
E S TVS VP + + + NP W EDP G V F
Sbjct: 1192 ETDSETVST-VPQNKRDDLV--NPYWIEDPDVRKGEVEF 1227
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.6
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 422 EPGSGTVSIIVPSSLKTSVRRGNPKWPEDPPRGPGRVFF 538
E S TVS VP + + + NP W EDP G V F
Sbjct: 1192 ETDSETVST-VPQNKRDDLV--NPYWIEDPDVRKGEVEF 1227
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = -1
Query: 665 HPSPEFSRSAESIRTPPQMRCSSRSE-----PYLPSIGFH 561
HP S+ + + PPQ+ + R E P +P + F+
Sbjct: 217 HPDSPNSKKSATPSPPPQLEVNERKENLTCQPAVPYVPFY 256
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/25 (28%), Positives = 12/25 (48%)
Frame = -1
Query: 698 YGYEPARHLHVHPSPEFSRSAESIR 624
+ Y P H +P+P + A+ R
Sbjct: 76 WNYSPDNHFEQYPNPTYYNLADPAR 100
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 21.4 bits (43), Expect = 8.1
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -1
Query: 101 PVTVVYRQNASAPSIFRAGCFGR*VLHPP 15
P VY A A SIF A + +PP
Sbjct: 136 PYAAVYTDPAFAASIFHAAATSLPLHYPP 164
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,089
Number of Sequences: 336
Number of extensions: 4156
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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