Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1400
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.     27   0.63 
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    27   0.83 
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   1.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   3.3  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    24   4.4  

>AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.
          Length = 114

 Score = 27.1 bits (57), Expect = 0.63
 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = -3

Query: 513 GGSSG---HFGLPRRTLVFKDEGTIIETVPLPGSGIGTGFPF 397
           GGSSG    F +P  T  F D  T I  +P  G+G G GFPF
Sbjct: 74  GGSSGAFPQFSIPSWTN-FTDAFTSI--LPFFGNGQGGGFPF 112


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 26.6 bits (56), Expect = 0.83
 Identities = 17/67 (25%), Positives = 30/67 (44%)
 Frame = -2

Query: 343 HRHKISP*A*DRLTREQLLFTRNPSPRQSSGPRWSICYYHQDLHRRRLQAAHAQTLLRSP 164
           H+H++ P    R  R+     R P  R++ G RW +  +  +     L+A H   + R+P
Sbjct: 220 HQHQLQPQQ-RRFHRQSPAHRRKPRWRRA-GRRWKVGQFLPESFCFALEAVHFAEIARTP 277

Query: 163 SRTSYSL 143
                +L
Sbjct: 278 ETLQVAL 284


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = -2

Query: 280 RNPSPRQSSGPRWSICYYHQDLHRRRLQAAHAQTLLRSPSRTSYSL-RLNDTKLKI*HHT 104
           + PSPR ++   W    YH++L    L     +  + +P     +L +  D  +     T
Sbjct: 212 QTPSPRDNAKKGWKTTLYHKELFAAALDRILHEMRVDTPDDLVKALDKACDATMSRLKKT 271

Query: 103 CR*R 92
           CR R
Sbjct: 272 CRWR 275


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 358 IIFKNNEK*RPLSERESGSYSGTRQRNRF 444
           IIF  N +   + ER  GS+S   +RN F
Sbjct: 37  IIFVRNNRALLIYERMGGSWSEVHKRNNF 65


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 482 RGNPKWPEDPPRGPG 526
           R  P+W +  P+GPG
Sbjct: 240 RNGPEWQQKGPKGPG 254


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,974
Number of Sequences: 2352
Number of extensions: 17601
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)