Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1400
         (758 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ118267-1|AAZ94749.1|   79|Homo sapiens immunoglobulin heavy ch...    33   1.1  
BC093754-1|AAH93754.1|  587|Homo sapiens hypothetical protein LO...    31   6.0  
BC093752-1|AAH93752.1|  587|Homo sapiens hypothetical protein LO...    31   6.0  
AF131737-1|AAD20026.1|  587|Homo sapiens Unknown protein.              31   6.0  
AC079353-1|AAY24034.1|  423|Homo sapiens unknown protein.              31   6.0  

>DQ118267-1|AAZ94749.1|   79|Homo sapiens immunoglobulin heavy chain
           VDJ region protein.
          Length = 79

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = -3

Query: 432 LPGSGIGTGFPFAQRALFFIIFKNYKKTRHIDIRSLLELRID*LASNYCSRETLLHVSPQ 253
           + GSG  T +    +  F I   N K T H+ + SL   R++  A  YCS+++ +HV   
Sbjct: 15  ISGSGDSTYYTNLAKGRFXISRDNSKNTVHLQMNSL---RVEDTAIYYCSKDSGMHVGQG 71

Query: 252 GLAGV 238
            L  V
Sbjct: 72  TLVTV 76


>BC093754-1|AAH93754.1|  587|Homo sapiens hypothetical protein
           LOC51057 protein.
          Length = 587

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +1

Query: 547 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 678
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>BC093752-1|AAH93752.1|  587|Homo sapiens hypothetical protein
           LOC51057 protein.
          Length = 587

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +1

Query: 547 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 678
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>AF131737-1|AAD20026.1|  587|Homo sapiens Unknown protein.
          Length = 587

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +1

Query: 547 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 678
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>AC079353-1|AAY24034.1|  423|Homo sapiens unknown protein.
          Length = 423

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +1

Query: 547 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 678
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,369,279
Number of Sequences: 237096
Number of extensions: 2721165
Number of successful extensions: 10042
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10041
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)