Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1400
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77657-8|CAB01151.2|  386|Caenorhabditis elegans Hypothetical pr...    31   0.89 
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p...    28   8.3  
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p...    28   8.3  

>Z77657-8|CAB01151.2|  386|Caenorhabditis elegans Hypothetical
           protein F08H9.7 protein.
          Length = 386

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -3

Query: 639 RREYPDTAANAVLFAFRTISPFYRIPWNSNAQAEKKTLPGPLGGSSGHFGLPRRTL 472
           RR++ +++ N++ F FRT S      W     A+  T P    G SG+F  P   L
Sbjct: 240 RRDF-ESSNNSISFVFRTDSSVTNKGWQLTWSAKPNTPPIKQSGQSGNFTSPNYPL 294


>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
           protein T05C12.10 protein.
          Length = 1169

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 175 EGSGREPLGASVGADLGGSSKYSSEALRTDVEKG 276
           EG+G E    S GA+ GGS     +   TDVE G
Sbjct: 774 EGAGGEAAAGSGGANKGGSDGDDDDVDVTDVEVG 807


>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
           protein T05C12.10 protein.
          Length = 1169

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 175 EGSGREPLGASVGADLGGSSKYSSEALRTDVEKG 276
           EG+G E    S GA+ GGS     +   TDVE G
Sbjct: 774 EGAGGEAAAGSGGANKGGSDGDDDDVDVTDVEVG 807


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,916,752
Number of Sequences: 27780
Number of extensions: 407480
Number of successful extensions: 1178
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)