Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1397
         (566 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0110 + 25914110-25915006,25915726-25915797,25916411-259166...    30   1.5  
06_03_0854 + 25400855-25403741,25406174-25407708                       29   2.6  
04_04_0940 - 29539138-29539626,29540125-29540531,29540631-295406...    28   6.0  
03_06_0670 + 35434203-35434355,35436601-35436729,35436978-354384...    28   6.0  
03_02_0798 - 11321590-11321685,11321802-11321888,11321972-113220...    28   6.0  
01_05_0635 - 23847255-23847287,23847397-23848083,23848178-238485...    28   6.0  

>02_05_0110 +
           25914110-25915006,25915726-25915797,25916411-25916699,
           25916864-25916949,25917267-25917490,25917674-25917740,
           25917830-25917889,25917995-25918078,25918475-25918555
          Length = 619

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 205 LDDEAFGYL-KRVIVTPAVYPRLLEFLHVDIQSTG 104
           LDDE   YL  R  V   +  RLL+F++VD  STG
Sbjct: 279 LDDEDISYLTNRAAVYIEMGKRLLKFIYVDPSSTG 313


>06_03_0854 + 25400855-25403741,25406174-25407708
          Length = 1473

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 387 AKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 262
           AKR+PT  T    P  AR  +++   +F   +P P P +V+S
Sbjct: 475 AKRAPTAVTVGAPPPQARTPAAAPAKAF-VSAPAPAPSSVIS 515


>04_04_0940 -
           29539138-29539626,29540125-29540531,29540631-29540662,
           29540809-29541086,29541164-29542515,29542616-29542874
          Length = 938

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -3

Query: 369 YATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDIDRDSGNL 232
           Y  P  +   +    S  G +FP DSP  V L+   L++  ++G+L
Sbjct: 757 YQNPKFAVVGSEFTKSGWGFAFPRDSPLSVDLSTAILELS-ENGDL 801


>03_06_0670 +
           35434203-35434355,35436601-35436729,35436978-35438409,
           35438524-35439014
          Length = 734

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +2

Query: 209 VTRMNGLTRFPLSLSISSETTAKGTGLGESAGKE 310
           + R NGL R P S+SISS+    G G   + GKE
Sbjct: 396 IRRPNGLVRPPESISISSKKPDAG-GASPAMGKE 428


>03_02_0798 -
           11321590-11321685,11321802-11321888,11321972-11322082,
           11322169-11322515,11322570-11322612,11322669-11322749,
           11323321-11323596,11325277-11325552
          Length = 438

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -3

Query: 294 SPKPVPLAVVSLDIDRDSGNLVNPFMRVTN*MTRHLATLRES*LLPPFTRACL 136
           SP+ +  AV S DID D G+L+   + +T     ++    +S    P   ACL
Sbjct: 72  SPEDLDSAVESTDIDTDIGSLIKGTVFMTTSNGAYVDIQSKSTAFLPLDEACL 124


>01_05_0635 -
           23847255-23847287,23847397-23848083,23848178-23848540,
           23848633-23848725,23848820-23848870,23849031-23849304,
           23849766-23850595
          Length = 776

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
 Frame = -2

Query: 532 GDERFGHVPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRS----RETISH 371
           G +R   VP   L  ++ AP +  +RAP PP     ++  VVVF R++    +E +SH
Sbjct: 99  GRKRHDAVPAAVL-RENMAPPE--ERAPPPPPAPPPKSSHVVVFSRQADPTEKENVSH 153


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,567,407
Number of Sequences: 37544
Number of extensions: 325541
Number of successful extensions: 1054
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)