Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1397
(566 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U04809-1|AAA19430.1| 622|Drosophila melanogaster cocaine-sensit... 29 4.4
BT025130-1|ABE73301.1| 217|Drosophila melanogaster IP07647p pro... 29 4.4
AY071023-1|AAL48645.1| 622|Drosophila melanogaster RE10485p pro... 29 4.4
AY061451-1|AAL28999.1| 249|Drosophila melanogaster LD38807p pro... 29 4.4
AE014134-1762|AAF52857.1| 217|Drosophila melanogaster CG13133-P... 29 4.4
AE013599-3863|AAF47200.1| 622|Drosophila melanogaster CG4545-PA... 29 4.4
AY075310-1|AAO39630.1| 145|Drosophila melanogaster AT31918p pro... 28 7.7
AY058593-1|AAL13822.1| 767|Drosophila melanogaster LD28817p pro... 28 7.7
AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 28 7.7
AE014297-1398|AAF54712.1| 767|Drosophila melanogaster CG6962-PA... 28 7.7
>U04809-1|AAA19430.1| 622|Drosophila melanogaster cocaine-sensitive
serotonin transporterprotein.
Length = 622
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 484 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 380
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>BT025130-1|ABE73301.1| 217|Drosophila melanogaster IP07647p
protein.
Length = 217
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = -3
Query: 402 FSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDIDRDSGNLVNP 223
FS D A P + +E TG+ F + S P A+ D+D D G NP
Sbjct: 152 FSADGILMITVPAPPKLDDVEREIEIEPTGNYFGSVSDPTAPKAIEQADVDGDGGE-ANP 210
>AY071023-1|AAL48645.1| 622|Drosophila melanogaster RE10485p
protein.
Length = 622
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 484 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 380
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>AY061451-1|AAL28999.1| 249|Drosophila melanogaster LD38807p
protein.
Length = 249
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -2
Query: 391 SRETISHLCYTSHVSL---QCQTRVKLNRVFFPR*FSQARSLGC 269
S+ TI CY ++S QCQ R+ +VFF S A C
Sbjct: 14 SKRTIFETCYMKNISFLKTQCQARILFCKVFFAVHSSNANVPSC 57
>AE014134-1762|AAF52857.1| 217|Drosophila melanogaster CG13133-PA
protein.
Length = 217
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = -3
Query: 402 FSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDIDRDSGNLVNP 223
FS D A P + +E TG+ F + S P A+ D+D D G NP
Sbjct: 152 FSADGILMITVPAPPKLDDVEREIEIEPTGNYFGSVSDPTAPKAIEQADVDGDGGE-ANP 210
>AE013599-3863|AAF47200.1| 622|Drosophila melanogaster CG4545-PA
protein.
Length = 622
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 484 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 380
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>AY075310-1|AAO39630.1| 145|Drosophila melanogaster AT31918p
protein.
Length = 145
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -3
Query: 150 TRACLNFFTLTFRALGRNHIASTPARAIAXLCFN*TVGFPLSVPVL 13
T AC+ + T+ F +G +IA+ + A + VGF L VL
Sbjct: 17 TTACIFYITMCFMMIGCKYIANANPKRFAKIVHPSAVGFVLVGTVL 62
>AY058593-1|AAL13822.1| 767|Drosophila melanogaster LD28817p
protein.
Length = 767
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 249 RDSGNLVNPFMRVTN*MTRHLATLRES*LLPPFTRACLNFFTLTF 115
R G L N + ++ T+ TLRE +P R C++ F TF
Sbjct: 536 RSEGFLKNFYKKIFGECTQEEVTLREFSRIPEVLRQCIDAFCRTF 580
>AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA
protein.
Length = 950
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -3
Query: 378 SPTYATPLMSPYNARLESSSTGSSFPADSPKP 283
+P++ + S Y A +S+S+G +PA +P+P
Sbjct: 153 APSFNSAPSSSYAAPSQSASSGGPYPAAAPRP 184
>AE014297-1398|AAF54712.1| 767|Drosophila melanogaster CG6962-PA
protein.
Length = 767
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 249 RDSGNLVNPFMRVTN*MTRHLATLRES*LLPPFTRACLNFFTLTF 115
R G L N + ++ T+ TLRE +P R C++ F TF
Sbjct: 536 RSEGFLKNFYKKIFGECTQEEVTLREFSRIPEVLRQCIDAFCRTF 580
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,216,306
Number of Sequences: 53049
Number of extensions: 523316
Number of successful extensions: 1791
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1786
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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