Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1396
         (663 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   6.5  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   6.5  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   8.6  

>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 86  RIQNARRDVEAHLDRGDRCYRFYS*HV 6
           R Q A  + E HL   +R  R+YS H+
Sbjct: 245 RWQLANLEFEFHLSLAERFPRYYSLHI 271


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
 Frame = +1

Query: 490 IPV-VTFRHLLL---KTLYTKGSIGRAFAVPMRTEHLDQASFCPFAPREVLSSL 639
           +P+ V F  LLL   KT      +GR+ A  M  EH    ++      E+LS++
Sbjct: 276 VPIPVRFLFLLLGPQKTDLDYHEVGRSIATLMSNEHFHDIAYTADDREELLSAI 329


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -1

Query: 138 EPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSM 31
           + R   GSK     S  + S+ E  RR+P    RSM
Sbjct: 106 DARPRFGSKAAAANSSATSSESEDERRTPPQDMRSM 141


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,090
Number of Sequences: 2352
Number of extensions: 13437
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)