Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1381
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    24   1.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.8  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.8  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   9.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.0  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 51  NLHTIKYK*ILKIYNSLTIESY*CTNL*F*LIIGE 155
           NLH I  K + +I      +   CT++ F L+IG+
Sbjct: 138 NLHKILVKVVREINGIFAFQVLMCTSMNFVLLIGD 172


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 305 PNSCALSLTYFLTRKH 258
           PN C +  T+F++ K+
Sbjct: 222 PNGCDIKATFFVSHKY 237


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 296 CALSLTYFLTRKHKYIFTFKRSKCDFSVESK 204
           C   L+Y L+     +F     KC++S+  K
Sbjct: 578 CRSGLSYHLSCAENMMFDPMSGKCEYSLGEK 608


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 260 HKYIFTFKRSKCDFSVESKM 201
           H  I TFK  +CDF   +K+
Sbjct: 196 HGKIKTFKCKQCDFVAITKL 215


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 119 LIRFYCQTIIY 87
           +I FYC T++Y
Sbjct: 317 MIAFYCMTLLY 327


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/36 (19%), Positives = 16/36 (44%)
 Frame = -3

Query: 110 FYCQTIIYF*YLFVFNRM*VYLIWYLFFTCVFKYIF 3
           FYC  II     + +    ++ +  L   C++ + +
Sbjct: 228 FYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYY 263


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 119 LIRFYCQTIIY 87
           +I FYC T++Y
Sbjct: 317 MIAFYCMTLLY 327


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 507 RPRNPLYTKFYENRWSRFRDSDYIHI 430
           +PR P  T+       +FRD  Y+ I
Sbjct: 117 KPRTPFTTQQLLALEKKFRDKQYLSI 142


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 123 YTNKILLSNYYIFLVFICI*SYVSLSYMV 37
           Y N+   S  ++F+ ++ + SY+   Y V
Sbjct: 125 YENQRTRSRIHLFVRYVFVTSYLLFDYFV 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,243
Number of Sequences: 336
Number of extensions: 3125
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)