Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1381
         (661 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g53100.1 68416.m05852 GDSL-motif lipase/hydrolase family prot...    28   6.3  
At3g29810.1 68416.m03794 phytochelatin synthetase family protein...    27   8.4  

>At3g53100.1 68416.m05852 GDSL-motif lipase/hydrolase family protein
           similar to  family II lipase EXL3 (GI:15054386), EXL1
           (GI:15054382) [Arabidopsis thaliana], SP|P40603
           Anther-specific proline-rich protein APG {Brassica
           napus}; contains InterPro Entry IPR001087 Lipolytic
           enzyme, G-D-S-L family
          Length = 351

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = -2

Query: 645 CFFKAVSCPQLRKIVLLFD--IDVGKN*LLKTRIKQHFLKINRS*IDFRP 502
           CFF       +  +++  D  +DVG N  L + +K +FL   R  ID RP
Sbjct: 17  CFFCKSKGAVVPALIMFGDSIVDVGNNNNLLSIVKSNFLPYGRDFIDQRP 66


>At3g29810.1 68416.m03794 phytochelatin synthetase family protein /
           COBRA cell expansion protein COBL2 similar to
           phytochelatin synthetase [Hordeum vulgare subsp.
           vulgare] GI:29570314; identified in Roudier, et al,
           Plant Phys. (2002) 130:538-548 (PMID:12376623); contains
           Pfam profile PF04833: Phytochelatin synthetase-like
           conserved region
          Length = 441

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +1

Query: 202 ILDSTEKSHLERL-NVNMYLC-LRVKK*VKERAQEFGRSNCSTINFNYNL 345
           ++ +  K++LE L     ++C +RV   VK   +E+ R   +  NFNYN+
Sbjct: 264 VVPALGKNNLEPLLQCTQHMCPIRVHWHVKTSYKEYWRVKVAITNFNYNM 313


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,910,662
Number of Sequences: 28952
Number of extensions: 218426
Number of successful extensions: 335
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 335
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)