Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1379
(626 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029690-1|ABL75747.1| 145|Drosophila melanogaster IP17407p pro... 30 2.9
BT029644-1|ABL75703.1| 145|Drosophila melanogaster IP17207p pro... 30 2.9
AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA... 29 3.9
BT021948-1|AAX51653.1| 772|Drosophila melanogaster LD13191p pro... 29 5.1
AY437926-1|AAR24077.1| 924|Drosophila melanogaster AMO protein. 29 5.1
AY283154-1|AAQ18122.1| 924|Drosophila melanogaster polycystin-2... 29 5.1
AE014135-30|ABC65827.1| 4056|Drosophila melanogaster CG33978-PA ... 29 5.1
AE014134-2193|AAF53183.2| 924|Drosophila melanogaster CG6504-PA... 29 5.1
AE014296-3022|AAN11678.1| 136|Drosophila melanogaster CG32198-P... 29 6.8
AE014298-3196|AAF50942.1| 530|Drosophila melanogaster CG17599-P... 28 9.0
>BT029690-1|ABL75747.1| 145|Drosophila melanogaster IP17407p
protein.
Length = 145
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 49 VASLYANETSVSDSKLEDDLYNSILVADY--DHSVEKSKQIYEDKKSEVITNVVNKLIRN 222
+A L + E S SD +L++ N I A+ + S E + IYE +S N + RN
Sbjct: 2 MADLVSGEASESDEELQEK--NKIFAAEISGEASEEDDEDIYEQGRSSNQVNSTASIYRN 59
Query: 223 N 225
N
Sbjct: 60 N 60
>BT029644-1|ABL75703.1| 145|Drosophila melanogaster IP17207p
protein.
Length = 145
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 49 VASLYANETSVSDSKLEDDLYNSILVADY--DHSVEKSKQIYEDKKSEVITNVVNKLIRN 222
+A L + E S SD +L++ N I A+ + S E + IYE +S N + RN
Sbjct: 2 MADLVSGEASESDEELQEK--NKIFAAEISGEASEEDDEDIYEQGRSSNQVNSTASIYRN 59
Query: 223 N 225
N
Sbjct: 60 N 60
>AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA
protein.
Length = 1976
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 65 PTKPQSPTPNSKTIFTTASSLPITTIPLKRANRSTRTRRAKSS 193
P + P P + TT + P +T P K+ + TRT SS
Sbjct: 298 PPTQEEPVPATTESTTTTTQAPASTTPKKKKRKPTRTPGTGSS 340
>BT021948-1|AAX51653.1| 772|Drosophila melanogaster LD13191p
protein.
Length = 772
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 461 SVGEQQGLLQDCEHSANQYLTLAVQTTPNH 550
+ G QG+L D +HS N++ T+A T N+
Sbjct: 698 TAGAGQGMLLDQQHSTNKHSTIATSTPCNN 727
>AY437926-1|AAR24077.1| 924|Drosophila melanogaster AMO protein.
Length = 924
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 523 VGSSNNPEPLTTWPTG--PTASKDLRPNGP 606
VGS+ + P T PTG PTA K +R GP
Sbjct: 63 VGSTRSAPPPATDPTGPPPTAGKPVRDTGP 92
>AY283154-1|AAQ18122.1| 924|Drosophila melanogaster polycystin-2
protein.
Length = 924
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 523 VGSSNNPEPLTTWPTG--PTASKDLRPNGP 606
VGS+ + P T PTG PTA K +R GP
Sbjct: 63 VGSTRSAPPPATDPTGPPPTAGKPVRDTGP 92
>AE014135-30|ABC65827.1| 4056|Drosophila melanogaster CG33978-PA
protein.
Length = 4056
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +1
Query: 64 ANETSVSDSKLEDDL-YNSILVADYDH--SVEKSKQIYEDKKSEVITNVVNKLIRNNKMN 234
A +S + L DDL Y+ L+ Y + S+ + + ++E++TN + + NN+ N
Sbjct: 813 AESSSQMMTTLRDDLIYSKTLLTTYTYYTSIFTNNETEVQSRTEIVTNYITDNVSNNETN 872
>AE014134-2193|AAF53183.2| 924|Drosophila melanogaster CG6504-PA
protein.
Length = 924
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 523 VGSSNNPEPLTTWPTG--PTASKDLRPNGP 606
VGS+ + P T PTG PTA K +R GP
Sbjct: 63 VGSTRSAPPPATDPTGPPPTAGKPVRDTGP 92
>AE014296-3022|AAN11678.1| 136|Drosophila melanogaster CG32198-PB
protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 65 PTKPQSP-TPNSKTIFTTASSLPITTIPLKRANRSTRTRR 181
PT P SP TP++ T T A S TT +R R R RR
Sbjct: 54 PTSPTSPTTPDASTATTAAPSTASTT--TERTRRRRRRRR 91
>AE014298-3196|AAF50942.1| 530|Drosophila melanogaster CG17599-PA
protein.
Length = 530
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/53 (20%), Positives = 28/53 (52%)
Frame = -1
Query: 620 LSGLQGPLGLKSFDAVGPVGHVVNGSGLFELPTSNTDSLSVHNLEVDLVVLPQ 462
+SG+ G G+ + + + ++ G+G + ++ D +S+ L +L + P+
Sbjct: 465 MSGMSGMSGMSAISGISGMSNIALGAGDDDFDLNSIDDISISKLTGELPLRPK 517
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,550,600
Number of Sequences: 53049
Number of extensions: 453308
Number of successful extensions: 2146
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2145
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -