Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1377
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   7.5  
EF519477-2|ABP73564.1|  177|Anopheles gambiae CTL4 protein.            23   9.9  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    23   9.9  

>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative
          tachykinin receptor protein.
          Length = 450

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = -1

Query: 87 AVTSRTC-ATESAEGSGREPAWS 22
          A TS  C A     GSG EP WS
Sbjct: 19 AGTSSCCPAGTGLNGSGTEPGWS 41


>EF519477-2|ABP73564.1|  177|Anopheles gambiae CTL4 protein.
          Length = 177

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +1

Query: 187 RQVSRCTLLSGFRLPWPPSCCHDDQRLSWC 276
           R V  C  + G  + W  + C D+ R   C
Sbjct: 146 RVVPFCVYIQGSTMSWVATSCDDEPRQFIC 175


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 122 VPVTVVYRQNASAPSIFRAGCFGR*VVAHS 211
           +P+ V+ ++N +AP+ + A C  R    H+
Sbjct: 36  IPLEVLEQENGTAPADWSASCTQRRTEDHA 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 834,987
Number of Sequences: 2352
Number of extensions: 18703
Number of successful extensions: 115
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)