Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1376
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81527-14|CAB04278.2| 506|Caenorhabditis elegans Hypothetical p... 28 7.3
Z79753-8|CAB02089.2| 506|Caenorhabditis elegans Hypothetical pr... 28 7.3
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 7.3
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 7.3
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical pr... 27 9.7
U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical pr... 27 9.7
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 268 SPRTSSPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 161
SPR S F + I T P+ + +S SEP P+ G
Sbjct: 702 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 737
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 268 SPRTSSPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 161
SPR S F + I T P+ + +S SEP P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 268 SPRTSSPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 161
SPR S F + I T P+ + +S SEP P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 268 SPRTSSPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 161
SPR S F + I T P+ + +S SEP P+ G
Sbjct: 702 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 737
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 268 SPRTSSPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 161
SPR S F + I T P+ + +S SEP P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 268 SPRTSSPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 161
SPR S F + I T P+ + +S SEP P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863
>Z81527-14|CAB04278.2| 506|Caenorhabditis elegans Hypothetical
protein F35E12.8 protein.
Length = 506
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = -3
Query: 401 GPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDISTYILT*IFKVRR 228
GP+ S N T S SS W P A G N +ST ++T F +++
Sbjct: 339 GPELSLTLSSTADNWLTPYNGRKGSIFSSSLWTPEATSGYNHTFVSTNVMTFTFNIKK 396
>Z79753-8|CAB02089.2| 506|Caenorhabditis elegans Hypothetical
protein F35E12.8 protein.
Length = 506
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = -3
Query: 401 GPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDISTYILT*IFKVRR 228
GP+ S N T S SS W P A G N +ST ++T F +++
Sbjct: 339 GPELSLTLSSTADNWLTPYNGRKGSIFSSSLWTPEATSGYNHTFVSTNVMTFTFNIKK 396
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 7.3
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = -1
Query: 280 TGATSPRTSSPEFSRSAESIRTPPQMRCSSRSEPYLPSIG-FHGTRTLRQKRKLFPDLSA 104
+ +T P +SSP+ S + + T + S+ PS+ T T + + P+ S
Sbjct: 379 SSSTVPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSSTPTGSSQSTITPEGST 438
Query: 103 ASSGHFGLPRRTLVFKVEGTIIETVPLPGSGIGT 2
ASS G T E T TVP GS +GT
Sbjct: 439 ASS-PTGSTGSTFSVATEVTSQSTVP-SGSSLGT 470
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 27.9 bits (59), Expect = 7.3
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = -1
Query: 280 TGATSPRTSSPEFSRSAESIRTPPQMRCSSRSEPYLPSIG-FHGTRTLRQKRKLFPDLSA 104
+ +T P +SSP+ S + + T + S+ PS+ T T + + P+ S
Sbjct: 586 SSSTVPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSSTPTGSSQSTITPEGST 645
Query: 103 ASSGHFGLPRRTLVFKVEGTIIETVPLPGSGIGT 2
ASS G T E T TVP GS +GT
Sbjct: 646 ASS-PTGSTGSTFSVATEVTSQSTVP-SGSSLGT 677
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 27.9 bits (59), Expect = 7.3
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = -1
Query: 280 TGATSPRTSSPEFSRSAESIRTPPQMRCSSRSEPYLPSIG-FHGTRTLRQKRKLFPDLSA 104
+ +T P +SSP+ S + + T + S+ PS+ T T + + P+ S
Sbjct: 586 SSSTVPSSSSPQPSSQSPAPNTGSTTPSQTSSQSPSPSMNPSSSTPTGSSQSTITPEGST 645
Query: 103 ASSGHFGLPRRTLVFKVEGTIIETVPLPGSGIGT 2
ASS G T E T TVP GS +GT
Sbjct: 646 ASS-PTGSTGSTFSVATEVTSQSTVP-SGSSLGT 677
>Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical
protein R11A8.1 protein.
Length = 552
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = -3
Query: 239 KVRREYPDTAANAVLFA---FRT--ISPFYRIPWNSNAQAEKKTLPGP 111
K+ +E D A N + FR I+PF P+ +N Q + +PGP
Sbjct: 435 KIEKEIADVAENQIRRIEENFRNPFIAPFAFFPYQNNFQMAPQNVPGP 482
>U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical
protein C04E7.4 protein.
Length = 542
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 223 IRTPPQMRCSSRSEPYLPSIGFHGT 149
I T Q + SS +P+LP++GF GT
Sbjct: 299 IVTISQGKASSLYDPHLPTVGFDGT 323
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,574,516
Number of Sequences: 27780
Number of extensions: 359137
Number of successful extensions: 1128
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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