Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1365
         (703 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16PW7 Cluster: Putative uncharacterized protein; n=1; ...    35   2.2  
UniRef50_Q6F0I0 Cluster: Putative uncharacterized protein; n=1; ...    33   5.1  

>UniRef50_Q16PW7 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 405

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
 Frame = +1

Query: 184 LVPYKLNNSLYYSFPDISRQEHV*WNHNSLITNVRNQGREFTRKNP-ANF 330
           L+P  + N+L+ +FP+I  Q++     N+  TN++N  ++FT+ NP  NF
Sbjct: 260 LIPSNIYNNLHSTFPNIIPQQNP---LNTFATNIQNGIQQFTQNNPLGNF 306


>UniRef50_Q6F0I0 Cluster: Putative uncharacterized protein; n=1;
           Mesoplasma florum|Rep: Putative uncharacterized protein
           - Mesoplasma florum (Acholeplasma florum)
          Length = 625

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 25/110 (22%), Positives = 49/110 (44%)
 Frame = +1

Query: 4   FFLDHNHLFRILNSYYCNIYKNEIIFI*NKYF*ADTLSIKTNIELSLSIECMK*AYCYYQ 183
           +FL  +     LN  Y  I K  I         +D L + TN +  +  + +     +Y 
Sbjct: 406 WFLKGSFKLTSLNMIYVKILK-AINLGKKNIILSDFLHLLTNKDYEMLFDTISKINEFYP 464

Query: 184 LVPYKLNNSLYYSFPDISRQEHV*WNHNSLITNVRNQGREFTRKNPANFC 333
            + + + +S  ++  DIS+ + + W+ N+ +  V+   +EF  KN  + C
Sbjct: 465 EISFIILHSRTFTISDISKNKKIYWSRNNEL--VKTTNKEFFEKNLIDIC 512


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,312,380
Number of Sequences: 1657284
Number of extensions: 11155143
Number of successful extensions: 18648
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18642
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)