SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1364
         (657 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    24   1.3  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   8.9  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   8.9  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   8.9  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   8.9  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   8.9  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 239 SLPHREKIQEEELKRTRHNAIST 307
           S+P  EK+   E+K TR  A +T
Sbjct: 113 SIPRHEKLTAAEIKLTRETAKNT 135


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 201 VTISGSQTAISNAHYLI 251
           VTI G     + AHYLI
Sbjct: 186 VTIFGESAGAAAAHYLI 202


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 201 VTISGSQTAISNAHYLI 251
           VTI G     + AHYLI
Sbjct: 186 VTIFGESAGAAAAHYLI 202


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 201 VTISGSQTAISNAHYLI 251
           VTI G     + AHYLI
Sbjct: 186 VTIFGESAGAAAAHYLI 202


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 201 VTISGSQTAISNAHYLI 251
           VTI G     + AHYLI
Sbjct: 186 VTIFGESAGAAAAHYLI 202


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 201 VTISGSQTAISNAHYLI 251
           VTI G     + AHYLI
Sbjct: 185 VTIFGESAGAAAAHYLI 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,943
Number of Sequences: 336
Number of extensions: 2739
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -