Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1364
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    29   0.13 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    29   0.13 
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         24   3.7  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   8.5  

>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 29.1 bits (62), Expect = 0.13
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 256 EDPGGGAEADQAQRHLDPHAVTTLPRPRPSAP 351
           + PGGG    + + HL  HA + LP    S+P
Sbjct: 463 DGPGGGGGGSRYEHHLSRHASSILPSSLVSSP 494


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 29.1 bits (62), Expect = 0.13
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 256 EDPGGGAEADQAQRHLDPHAVTTLPRPRPSAP 351
           + PGGG    + + HL  HA + LP    S+P
Sbjct: 439 DGPGGGGGGSRYEHHLSRHASSILPSSLVSSP 470


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 365 TCAWRGAEGRGRGSVVTA*GSRW 297
           +CAWR A       ++T  G RW
Sbjct: 4   SCAWRCARASPSRPILTTRGRRW 26


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 165 SSRSGCWPRTSAVSPTSCALPAL 97
           SSRSG  P +S+ S  SC L  +
Sbjct: 71  SSRSGGLPSSSSSSSLSCLLATI 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,338
Number of Sequences: 2352
Number of extensions: 10896
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)