Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1363
         (672 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    54   4e-07
AF090928-1|AAF24043.1|  112|Homo sapiens PRO0470 protein.              31   2.8  
AK125277-1|BAC86110.1|  468|Homo sapiens protein ( Homo sapiens ...    30   8.7  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 54.4 bits (125), Expect = 4e-07
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = -2

Query: 509 TKSNVAMNAWLPQASYPCGNFSGTSC*K 426
           +KS+VAMNAW PQASYPCGNFS TSC K
Sbjct: 10  SKSDVAMNAWPPQASYPCGNFSDTSCLK 37


>AF090928-1|AAF24043.1|  112|Homo sapiens PRO0470 protein.
          Length = 112

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 515 RRTKSNVAMNAWLPQASYPC 456
           +RT+SN+  N WLP  + PC
Sbjct: 5   KRTRSNINQNTWLPNRNLPC 24


>AK125277-1|BAC86110.1|  468|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43287 fis, clone MESAN2006563. ).
          Length = 468

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 269 RPSQTPAWQCPRTGSRGSFKRRR 201
           RP +TP W+ PR  +R  ++ RR
Sbjct: 31  RPGRTPKWRLPRISARAPYRLRR 53


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,977,363
Number of Sequences: 237096
Number of extensions: 2453599
Number of successful extensions: 4593
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4593
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)