Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1362
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      27   0.59 
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   9.7  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    23   9.7  

>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 27.1 bits (57), Expect = 0.59
 Identities = 11/41 (26%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +2

Query: 203 RKYVKLIYRNYNLALKLVPQPIPRMREFYGDGVD-KHTELV 322
           R ++KL+Y+N  +A++ + + +  ++  Y D  + +H EL+
Sbjct: 67  RGFIKLVYQNIFMAMQSMIRAMDLLKILYSDPANIEHAELI 107


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 267  SLE*ENSTAMVLTSTLNSSVGSSL 338
            SL+ E+  + +LTSTL + +G  L
Sbjct: 1082 SLQDEHFVSQILTSTLENDIGFRL 1105


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 78  VVNNLIIDKRRNTMEYCYKLWVG-NGQDIVKKYFPL 182
           ++N  I+ + RN+ME+C     G  G  +V++  P+
Sbjct: 85  LLNRKILQRLRNSMEHCMAGSGGLGGGAVVREALPI 120


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,810
Number of Sequences: 2352
Number of extensions: 15045
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)