Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1358
(771 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30216| Best HMM Match : TIL (HMM E-Value=3.1) 72 4e-13
SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_27787| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_49224| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_27353| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_58055| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_54389| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_51835| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_48809| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_41857| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_40886| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_40435| Best HMM Match : DUF1677 (HMM E-Value=4.2) 51 9e-07
SB_9214| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_5959| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_3984| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_47626| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_55300| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_53216| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_24856| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_16637| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59) 47 1e-05
SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1) 46 3e-05
SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_24059| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.084
SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.084
SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_44604| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_10132| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2) 31 0.78
SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_1848| Best HMM Match : Galactosyl_T (HMM E-Value=1.4e-26) 31 1.4
SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_54195| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_46486| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.7) 30 1.8
SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 29 4.2
SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
>SB_30216| Best HMM Match : TIL (HMM E-Value=3.1)
Length = 212
Score = 72.1 bits (169), Expect = 4e-13
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +2
Query: 611 TAGRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
TAGRWPWK ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 1 TAGRWPWKLESAKECVTTHLPKQLALKMDGAQASHLYRAV 40
>SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 72.1 bits (169), Expect = 4e-13
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +2
Query: 611 TAGRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
TAGRWPWK ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 1 TAGRWPWKLESAKECVTTHLPKQLALKMDGAQASHLYRAV 40
>SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 72.1 bits (169), Expect = 4e-13
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +2
Query: 611 TAGRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
TAGRWPWK ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 80 TAGRWPWKLESAKECVTTHLPKQLALKMDGAQASHLYRAV 119
>SB_27787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +2
Query: 611 TAGRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
TAGR + ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 1 TAGRVAMEVESAKECVTTHLPKQLALKMDGAQASHLYRAV 40
>SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +2
Query: 632 KSESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
K ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 9 KLESAKECVTTHLPKQLALKMDGAQASHLYRAV 41
>SB_49224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +2
Query: 632 KSESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
K ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 2 KLESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_27353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +2
Query: 632 KSESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
K ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 2 KLESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_58055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 638 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_54389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 638 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_51835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 638 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_48809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 638 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_41857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 638 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_40886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 638 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_40435| Best HMM Match : DUF1677 (HMM E-Value=4.2)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 638 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_9214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 638 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_5959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 638 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_3984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 638 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_47626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 638 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 730
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 10 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 40
>SB_55300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +2
Query: 641 SAKECATTHLPKQPALKMDGAEAFCLYTTV 730
SAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 5 SAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_53216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +2
Query: 641 SAKECATTHLPKQPALKMDGAEAFCLYTTV 730
SAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 5 SAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_24856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +2
Query: 641 SAKECATTHLPKQPALKMDGAEAFCLYTTV 730
SAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 5 SAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_16637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +2
Query: 641 SAKECATTHLPKQPALKMDGAEAFCLYTTV 730
SAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 5 SAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +2
Query: 644 AKECATTHLPKQPALKMDGAEAFCLYTTV 730
AKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 39 AKECVTTHLPKQLALKMDGAQASHLYRAV 67
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 558 KAPKKRSWDTMKGVGRS*QQDGGHGSRNPLR 650
+ +RS D KGVG S QQDGGHGS NP +
Sbjct: 10 RCQSRRSSDPTKGVGCSRQQDGGHGSWNPAK 40
>SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59)
Length = 1060
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = +3
Query: 558 KAPKKRSWDTMKGVGRS*QQDGGHGSRNPLRSVQRL 665
+ +RS D KGVG S QQDGGHGS NPLR QRL
Sbjct: 10 RCQSRRSSDPTKGVGCSRQQDGGHGSWNPLRKGQRL 45
>SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1)
Length = 276
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/64 (46%), Positives = 35/64 (54%)
Frame = -1
Query: 618 PAVMSDQRLSWCPMSVF*AP*TTFGSSHSASSAYQNCPLGTVIRSPASSFE*AGVLTHLK 439
P V SD+R W P F GSS ASS YQN P T I P + + G+LT+LK
Sbjct: 62 PFVGSDERRLWHPYRAF-------GSSRIASSGYQNGPTRTRIHCPGFNKQ-VGLLTNLK 113
Query: 438 FENR 427
FENR
Sbjct: 114 FENR 117
>SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = -2
Query: 251 NRYGPPSGFPLTST*PGIVHHLSGPSICA 165
NRY PP FPL S GIVHHLSGP+ CA
Sbjct: 1 NRYEPPPEFPLASPYSGIVHHLSGPNRCA 29
>SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -1
Query: 252 ESLRSSIRVSPDFDLTRHSSPSFGSQHLCS 163
ESLR+S RVS F L RHSSPSFGSQ + S
Sbjct: 35 ESLRASTRVSSGFTLFRHSSPSFGSQQMRS 64
>SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = +2
Query: 647 KECATTHLPKQPALKMDGAEAFCLYTTV 730
KEC TT LPKQ ALKMDGA+A LY V
Sbjct: 40 KECVTTPLPKQLALKMDGAQASHLYRAV 67
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +3
Query: 558 KAPKKRSWDTMKGVGRS*QQDGGHGSRNPLR 650
+ +RS D KGVG S QQDGGHGS NPL+
Sbjct: 10 RCQSRRSSDPTKGVGCSRQQDGGHGSWNPLK 40
>SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 33
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +1
Query: 571 NAHGTP*KALVAHDSRTVAMEVGIR 645
+AH TP K LVA DSRTVAMEVGIR
Sbjct: 9 DAHQTPQKVLVALDSRTVAMEVGIR 33
>SB_24059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 42
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 632 KSESAKECATTHLPKQPALKM 694
K ESAKEC TTHLPKQ ALKM
Sbjct: 2 KVESAKECVTTHLPKQLALKM 22
>SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/25 (76%), Positives = 19/25 (76%)
Frame = -1
Query: 549 FGSSHSASSAYQNCPLGTVIRSPAS 475
FGSS ASSAYQN PLGT I PAS
Sbjct: 21 FGSSRIASSAYQNGPLGTRIHCPAS 45
>SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 34.7 bits (76), Expect = 0.084
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -2
Query: 719 IGKTLQRHPFSGLVASA 669
IG TL+RHPFSGLVASA
Sbjct: 24 IGATLERHPFSGLVASA 40
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 607 ERPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
E+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 41 EQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 85
>SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 34.7 bits (76), Expect = 0.084
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -2
Query: 719 IGKTLQRHPFSGLVASA 669
IG TL+RHPFSGLVASA
Sbjct: 22 IGATLERHPFSGLVASA 38
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 607 ERPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
E+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 39 EQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTSNSHSLSGF 83
>SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -3
Query: 604 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGFIVRVSRSSHPFKV 437
+PTPF+ S ER L LN + + K PT + H +SGF SR+S+ FKV
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGFNY-ASRTSYQFKV 57
>SB_44604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -2
Query: 251 NRYGPPSGFPLTST*PGIVHH 189
NRY PP FPL S GIVHH
Sbjct: 1 NRYEPPPEFPLASPYSGIVHH 21
>SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -3
Query: 607 ERPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
E+PTPF+ S ER L LN + + L K PT + H +SGF
Sbjct: 58 EQPTPFVGSDERRLWHLNRAFGSSRIASSALQKWPTRNSHSLSGF 102
>SB_10132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 32.3 bits (70), Expect = 0.45
Identities = 16/63 (25%), Positives = 25/63 (39%)
Frame = -3
Query: 628 WPPSCCHERPTPFMVSHERFLGALNYVWFIPQRQFCLPKLPTWHRHQISGFIVRVSRSSH 449
W P P P + +H + A W P + P LP W H ++G + +
Sbjct: 34 WTPHSLTRHPYPLLDTHIPYWTAHIPYW-TPYLPYWTPYLPYWTPHSLTGHLASPTPDRD 92
Query: 448 PFK 440
P+K
Sbjct: 93 PYK 95
>SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2)
Length = 125
Score = 31.5 bits (68), Expect = 0.78
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -3
Query: 628 WPPSCCH--ERPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
W P + E+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 71 WLPQASYPCEQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 124
>SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -3
Query: 610 HERPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
+E+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 122 YEQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 167
>SB_1848| Best HMM Match : Galactosyl_T (HMM E-Value=1.4e-26)
Length = 308
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 171 NAGTRKMVNYAWSGRSQGKP*WRTVAILRANRSSE 275
NA RK + + W P WRTV ++ AN + E
Sbjct: 75 NAARRKEIRFTWGTDFLPSPRWRTVFLIGANDNQE 109
>SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1
Query: 300 ISLSPLYPVPTIDLHAES 247
ISLSPLYP TIDLH S
Sbjct: 38 ISLSPLYPNLTIDLHVRS 55
>SB_54195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 171 NAGTRKMVNYAWSGRSQGKP*WRTVAILRANRSSE 275
NA RK + + W P WRTV ++ AN + E
Sbjct: 79 NAARRKEIRFTWGTDFLPTPRWRTVFLIGANDNQE 113
>SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 607 ERPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
E+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 38 EQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 82
>SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 607 ERPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
E+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 39 EQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 83
>SB_46486| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.7)
Length = 703
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 158 RSEHKCWDPKD--GELCLVRSKSGETLMEDRSDSACKSIVGTGYRGERLIEPSSSWFRPK 331
+++ C D ++ GE +KS +T D S ++C+S++ TG + L + S RP+
Sbjct: 303 QNDLSCSDSENEGGESFSTTAKSKDTKANDYSMTSCRSVLATGLNEQSLAKRKESIRRPE 362
>SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -3
Query: 604 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
+PTPF+ S ER L LN+ + + K PT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNHAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 663 VVAHSLADSDFHGHRPAVMSDQRLSWCPMSVF 568
+ H + ++DF G R A+M+D +L C S+F
Sbjct: 386 LTTHFMDEADFLGDRIAIMADGQLRCCGSSLF 417
>SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 604 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAYGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 604 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 604 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 604 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 604 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 604 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTKNSHSLSGF 45
>SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 604 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 604 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 604 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 604 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 604 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
>SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 604 RPTPFMVSHERFLGALNYVWFIPQ-RQFCLPKLPTWHRHQISGF 476
+PTPF+ S ER L LN + + K PT + H +SGF
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLSGF 45
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,864,347
Number of Sequences: 59808
Number of extensions: 554060
Number of successful extensions: 1207
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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