Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1358
(771 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012669-1|AAT08475.1| 46|Drosophila melanogaster LD48059p pro... 52 9e-07
BT010292-1|AAQ23610.1| 662|Drosophila melanogaster LD16296p pro... 31 1.7
BT001262-1|AAN71018.1| 833|Drosophila melanogaster AT02677p pro... 31 1.7
AE014134-226|AAF51398.3| 662|Drosophila melanogaster CG4896-PB,... 31 1.7
AE014134-225|AAF51399.3| 662|Drosophila melanogaster CG4896-PA,... 31 1.7
AE014134-224|AAN10483.2| 949|Drosophila melanogaster CG4896-PD,... 31 1.7
AE014134-223|AAN10482.2| 968|Drosophila melanogaster CG4896-PC,... 31 1.7
EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire prot... 30 4.0
AE014296-166|AAN11456.1| 804|Drosophila melanogaster CG18214-PD... 30 4.0
L77907-1|AAC37264.1| 1883|Drosophila melanogaster chromodomain-h... 29 9.3
EF120981-1|ABO93159.1| 637|Drosophila melanogaster misfire prot... 29 9.3
EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire prot... 29 9.3
EF120978-1|ABO93156.1| 839|Drosophila melanogaster misfire prot... 29 9.3
EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire prot... 29 9.3
EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire prot... 29 9.3
BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p pro... 29 9.3
AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p pro... 29 9.3
AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA... 29 9.3
AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA ... 29 9.3
>BT012669-1|AAT08475.1| 46|Drosophila melanogaster LD48059p
protein.
Length = 46
Score = 52.0 bits (119), Expect = 9e-07
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +2
Query: 164 EHKCWDPKDGELCLVRSKSGETLMEDRSDS 253
EH C DPKDGEL L+R KSGETLMEDR+ S
Sbjct: 9 EHICCDPKDGELYLIRLKSGETLMEDRNSS 38
>BT010292-1|AAQ23610.1| 662|Drosophila melanogaster LD16296p
protein.
Length = 662
Score = 31.1 bits (67), Expect = 1.7
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +3
Query: 60 NARRSLREDEIIELRS*FSHSRGVS--FPISE*RRALSTNAGTRKMVNYAWS-GRSQGKP 230
N R E EI L+S S G + PIS STN G+R M WS G+ GK
Sbjct: 562 NRSRERFEQEIKTLQSRQKDSFGATAAMPIS------STNVGSRLMQKMGWSEGQGLGKK 615
Query: 231 *WRTVAILRAN-RSSELGIGAKD*SNHLVAGS 323
I+ A+ RS+ +G+G + H+ G+
Sbjct: 616 NQGRTEIIEADGRSNNVGLGNN--TGHMAPGN 645
>BT001262-1|AAN71018.1| 833|Drosophila melanogaster AT02677p
protein.
Length = 833
Score = 31.1 bits (67), Expect = 1.7
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +3
Query: 60 NARRSLREDEIIELRS*FSHSRGVS--FPISE*RRALSTNAGTRKMVNYAWS-GRSQGKP 230
N R E EI L+S S G + PIS STN G+R M WS G+ GK
Sbjct: 733 NRSRERFEQEIKTLQSRQKDSFGATAAMPIS------STNVGSRLMQKMGWSEGQGLGKK 786
Query: 231 *WRTVAILRAN-RSSELGIGAKD*SNHLVAGS 323
I+ A+ RS+ +G+G + H+ G+
Sbjct: 787 NQGRTEIIEADGRSNNVGLGNN--TGHMAPGN 816
>AE014134-226|AAF51398.3| 662|Drosophila melanogaster CG4896-PB,
isoform B protein.
Length = 662
Score = 31.1 bits (67), Expect = 1.7
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +3
Query: 60 NARRSLREDEIIELRS*FSHSRGVS--FPISE*RRALSTNAGTRKMVNYAWS-GRSQGKP 230
N R E EI L+S S G + PIS STN G+R M WS G+ GK
Sbjct: 562 NRSRERFEQEIKTLQSRQKDSFGATAAMPIS------STNVGSRLMQKMGWSEGQGLGKK 615
Query: 231 *WRTVAILRAN-RSSELGIGAKD*SNHLVAGS 323
I+ A+ RS+ +G+G + H+ G+
Sbjct: 616 NQGRTEIIEADGRSNNVGLGNN--TGHMAPGN 645
>AE014134-225|AAF51399.3| 662|Drosophila melanogaster CG4896-PA,
isoform A protein.
Length = 662
Score = 31.1 bits (67), Expect = 1.7
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +3
Query: 60 NARRSLREDEIIELRS*FSHSRGVS--FPISE*RRALSTNAGTRKMVNYAWS-GRSQGKP 230
N R E EI L+S S G + PIS STN G+R M WS G+ GK
Sbjct: 562 NRSRERFEQEIKTLQSRQKDSFGATAAMPIS------STNVGSRLMQKMGWSEGQGLGKK 615
Query: 231 *WRTVAILRAN-RSSELGIGAKD*SNHLVAGS 323
I+ A+ RS+ +G+G + H+ G+
Sbjct: 616 NQGRTEIIEADGRSNNVGLGNN--TGHMAPGN 645
>AE014134-224|AAN10483.2| 949|Drosophila melanogaster CG4896-PD,
isoform D protein.
Length = 949
Score = 31.1 bits (67), Expect = 1.7
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +3
Query: 60 NARRSLREDEIIELRS*FSHSRGVS--FPISE*RRALSTNAGTRKMVNYAWS-GRSQGKP 230
N R E EI L+S S G + PIS STN G+R M WS G+ GK
Sbjct: 849 NRSRERFEQEIKTLQSRQKDSFGATAAMPIS------STNVGSRLMQKMGWSEGQGLGKK 902
Query: 231 *WRTVAILRAN-RSSELGIGAKD*SNHLVAGS 323
I+ A+ RS+ +G+G + H+ G+
Sbjct: 903 NQGRTEIIEADGRSNNVGLGNN--TGHMAPGN 932
>AE014134-223|AAN10482.2| 968|Drosophila melanogaster CG4896-PC,
isoform C protein.
Length = 968
Score = 31.1 bits (67), Expect = 1.7
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +3
Query: 60 NARRSLREDEIIELRS*FSHSRGVS--FPISE*RRALSTNAGTRKMVNYAWS-GRSQGKP 230
N R E EI L+S S G + PIS STN G+R M WS G+ GK
Sbjct: 868 NRSRERFEQEIKTLQSRQKDSFGATAAMPIS------STNVGSRLMQKMGWSEGQGLGKK 921
Query: 231 *WRTVAILRAN-RSSELGIGAKD*SNHLVAGS 323
I+ A+ RS+ +G+G + H+ G+
Sbjct: 922 NQGRTEIIEADGRSNNVGLGNN--TGHMAPGN 951
>EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire
protein.
Length = 1349
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 633 SRNPLRSVQRLTCRSNQP*KWMALKR 710
SRNPLR +QRL + P KW+ + R
Sbjct: 479 SRNPLRKLQRLKYLTPPPLKWVPIAR 504
>AE014296-166|AAN11456.1| 804|Drosophila melanogaster CG18214-PD,
isoform D protein.
Length = 804
Score = 29.9 bits (64), Expect = 4.0
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +1
Query: 529 GAVG*TKRSLRRLKNAHGTP*KALVAHDSRTVAMEVGIR*GVCNDSPAEATSPEN 693
G VG K SL RLK TP K V+ + + I G + SP+ A S +N
Sbjct: 22 GGVGGKKSSLERLKCGEDTPTKGYVSLPNTPLPTSAPIAVGDPSPSPSIADSAQN 76
>L77907-1|AAC37264.1| 1883|Drosophila melanogaster
chromodomain-helicase-DNA-bindingprotein protein.
Length = 1883
Score = 28.7 bits (61), Expect = 9.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 197 VHHLSGPSICAQSAPSFTDWKRD 129
+HHL GP +C + T W+R+
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595
>EF120981-1|ABO93159.1| 637|Drosophila melanogaster misfire
protein.
Length = 637
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 633 SRNPLRSVQRLTCRSNQP*KWMALKR 710
S+NPLR +QRL + P KW+ + R
Sbjct: 477 SKNPLRKLQRLKYLTPPPLKWVPIAR 502
>EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire
protein.
Length = 1396
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 633 SRNPLRSVQRLTCRSNQP*KWMALKR 710
S+NPLR +QRL + P KW+ + R
Sbjct: 567 SKNPLRKLQRLKYLTPPPLKWVPIAR 592
>EF120978-1|ABO93156.1| 839|Drosophila melanogaster misfire
protein.
Length = 839
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 633 SRNPLRSVQRLTCRSNQP*KWMALKR 710
S+NPLR +QRL + P KW+ + R
Sbjct: 28 SKNPLRKLQRLKYLTPPPLKWVPIAR 53
>EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire
protein.
Length = 1437
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 633 SRNPLRSVQRLTCRSNQP*KWMALKR 710
S+NPLR +QRL + P KW+ + R
Sbjct: 567 SKNPLRKLQRLKYLTPPPLKWVPIAR 592
>EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire
protein.
Length = 1659
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 633 SRNPLRSVQRLTCRSNQP*KWMALKR 710
S+NPLR +QRL + P KW+ + R
Sbjct: 789 SKNPLRKLQRLKYLTPPPLKWVPIAR 814
>BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p
protein.
Length = 1645
Score = 28.7 bits (61), Expect = 9.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 197 VHHLSGPSICAQSAPSFTDWKRD 129
+HHL GP +C + T W+R+
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595
>AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p
protein.
Length = 1101
Score = 28.7 bits (61), Expect = 9.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 197 VHHLSGPSICAQSAPSFTDWKRD 129
+HHL GP +C + T W+R+
Sbjct: 41 IHHLYGPFLCVVPLSTMTAWQRE 63
>AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA
protein.
Length = 1782
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 633 SRNPLRSVQRLTCRSNQP*KWMALKR 710
S+NPLR +QRL + P KW+ + R
Sbjct: 751 SKNPLRKLQRLKYLTPPPLKWVPIAR 776
>AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA
protein.
Length = 1883
Score = 28.7 bits (61), Expect = 9.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 197 VHHLSGPSICAQSAPSFTDWKRD 129
+HHL GP +C + T W+R+
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,163,007
Number of Sequences: 53049
Number of extensions: 823630
Number of successful extensions: 1693
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1693
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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