BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbVm1358 (771 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC091125-5|AAK27884.2| 297|Caenorhabditis elegans Hypothetical ... 29 4.8 >AC091125-5|AAK27884.2| 297|Caenorhabditis elegans Hypothetical protein Y67D2.7 protein. Length = 297 Score = 28.7 bits (61), Expect = 4.8 Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 1/94 (1%) Frame = -1 Query: 381 DETVLKFYIDASYPEGNFGRNQLLDGSISLSPLYPVPTIDLHAESLR-SSIRVSPDFDLT 205 +E +L+ ID P GR+ ++D S PT AES R +++ P ++ Sbjct: 150 NEAILRMNIDEISPSDTPGRDSVVDSPFSAENFDKTPTHQGAAESTREQQLKIPPPPEIE 209 Query: 204 RHSSPSFGSQHLCSERAFIH*LETRRLGSAKITN 103 + + + +H ++A L + G+ + N Sbjct: 210 VNPAIATRFEHAFRQKALGTDLNQQIQGNQQYNN 243 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,201,194 Number of Sequences: 27780 Number of extensions: 408838 Number of successful extensions: 775 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 752 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 775 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1851132448 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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