Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1355
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB001420-1|BAA20134.1|  714|Drosophila melanogaster neurospecifi...    31   1.4  
AF037164-1|AAD02091.1|  724|Drosophila melanogaster receptor tyr...    29   5.5  
AE013599-1644|AAF58420.2|  724|Drosophila melanogaster CG4007-PA...    29   5.5  
AE014296-3084|AAF49208.1|  430|Drosophila melanogaster CG6839-PA...    29   7.2  

>AB001420-1|BAA20134.1|  714|Drosophila melanogaster neurospecific
           receptor tyrosinekinase protein.
          Length = 714

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 585 NCSHFPYYTSASKTPNCS 532
           NCS  PYY ++ + PNCS
Sbjct: 170 NCSSLPYYNASMRRPNCS 187


>AF037164-1|AAD02091.1|  724|Drosophila melanogaster receptor
           tyrosine kinase protein.
          Length = 724

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 585 NCSHFPYYTSASKTPNCS 532
           NCS  P+Y ++ + PNCS
Sbjct: 186 NCSSLPHYNASMRRPNCS 203


>AE013599-1644|AAF58420.2|  724|Drosophila melanogaster CG4007-PA
           protein.
          Length = 724

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 585 NCSHFPYYTSASKTPNCS 532
           NCS  P+Y ++ + PNCS
Sbjct: 186 NCSSLPHYNASMRRPNCS 203


>AE014296-3084|AAF49208.1|  430|Drosophila melanogaster CG6839-PA
           protein.
          Length = 430

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 145 QFLLLVVGPLVSPRGWVPLPC 207
           +F LLVVG L +P  W  +PC
Sbjct: 5   RFSLLVVGLLAAPAAWARVPC 25


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,477,135
Number of Sequences: 53049
Number of extensions: 552331
Number of successful extensions: 891
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)