Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1355
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81545-8|CAB04444.1|  327|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AC024874-1|AAK31571.1|  169|Caenorhabditis elegans Hypothetical ...    29   2.9  
AF068709-5|AAC19250.2|  332|Caenorhabditis elegans Serpentine re...    28   6.6  
Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z78545-4|CAE17854.1|  106|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U61948-5|AAB03149.2|  509|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z81545-8|CAB04444.1|  327|Caenorhabditis elegans Hypothetical
           protein F49H6.11 protein.
          Length = 327

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 21/74 (28%), Positives = 38/74 (51%)
 Frame = -1

Query: 575 IFLITPLLLRHQIVPLYT*LHNLKKIKFKLLHVSYLLVLFRKNIE*TNIKYQCIVMIPIF 396
           I ++  L + +  +P Y  +HNLKK K K L +   +  F K ++ +   +  ++ I +F
Sbjct: 20  IAMLVSLFISYLTLPFYFYVHNLKKHKEKNLPI---VKFFYKAVKLSYFVF-IVLAIVLF 75

Query: 395 FLLLRWVDELTAHL 354
           F + R  +   AHL
Sbjct: 76  FCISRESNSTKAHL 89


>AC024874-1|AAK31571.1|  169|Caenorhabditis elegans Hypothetical
           protein Y92C3A.3 protein.
          Length = 169

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 623 LFKNFLPLYN*NLTVHIFLITPLLLRHQIVP 531
           L K+FLP+YN  +  H F I  L++ HQ  P
Sbjct: 128 LIKDFLPIYN-LIKAHRFAIHQLVIEHQEKP 157


>AF068709-5|AAC19250.2|  332|Caenorhabditis elegans Serpentine
           receptor, class t protein29 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = -1

Query: 533 PLYT*LHNLKKIKFKLLHVSYLLVLFRKNIE*TNIKYQC---IVMIPIFFLLLRWVDELT 363
           PLY     +  + F +L++  L VLF K     NIK  C   ++ +    +L  WV+ +T
Sbjct: 35  PLYGIADMIYGLTFNMLYIPILSVLFEKE----NIKMSCFKIMIFLASVDMLALWVNSIT 90


>Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical
           protein F14F8.12 protein.
          Length = 329

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
 Frame = -1

Query: 587 LTVHIFLITPLLLRHQIVPLYT*LHNLKKIKFKLLHVSYLLVLFRKNIE*TNIKYQCIVM 408
           ++  + LI   ++ +  +P Y  +HNL + + K+       +LF   +  T + Y     
Sbjct: 16  ISSELILIFICIVSYSTLPFYIYVHNLNRHREKVEMGQNYFILFCFEVGLTVVDYFIATF 75

Query: 407 IPIFFLL--LRWVDELTAHLVL 348
           I +F +L  +  + + T H++L
Sbjct: 76  ILLFIILFYILHILQQTFHVIL 97


>Z78545-4|CAE17854.1|  106|Caenorhabditis elegans Hypothetical
           protein M03B6.5 protein.
          Length = 106

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +1

Query: 379 HLSNKKNIGIITIHWYFIFVYSIFFL 456
           H  N++NIG I+I W++ FV  + FL
Sbjct: 68  HPQNRRNIGDISIVWFY-FVLLMLFL 92


>U61948-5|AAB03149.2|  509|Caenorhabditis elegans Hypothetical
           protein C46A5.2 protein.
          Length = 509

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
 Frame = -3

Query: 645 YKNLFSCFIQKLFTSVQLKFNCSHFPYY----TSASKTPNCSPLYII 517
           Y+  F+CF+ K    +  ++NC+  PYY    +     P C P  I+
Sbjct: 355 YQGKFTCFVYKWLMQLIEQYNCT-VPYYKYTLSYLKDVPICEPDVIV 400


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,356,410
Number of Sequences: 27780
Number of extensions: 294897
Number of successful extensions: 639
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)