Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1354
(669 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 144 1e-33
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 136 5e-31
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 136 6e-31
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 135 8e-31
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 134 1e-30
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 134 2e-30
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 130 4e-29
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 129 5e-29
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 129 7e-29
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 126 4e-28
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 124 3e-27
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 120 4e-26
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 119 6e-26
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 118 1e-25
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 116 5e-25
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 114 2e-24
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 113 5e-24
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 112 6e-24
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 112 6e-24
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 107 2e-22
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 107 3e-22
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 104 2e-21
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 102 9e-21
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 101 2e-20
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 97 3e-19
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 96 8e-19
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 95 1e-18
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 95 1e-18
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 93 4e-18
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 91 3e-17
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 90 5e-17
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 85 1e-15
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 83 6e-15
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 82 1e-14
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 81 2e-14
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 81 2e-14
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 80 4e-14
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 80 4e-14
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 79 1e-13
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 79 1e-13
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 79 1e-13
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 78 2e-13
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 77 3e-13
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 77 4e-13
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 77 5e-13
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 77 5e-13
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 76 9e-13
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 75 1e-12
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 75 2e-12
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 74 3e-12
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 74 3e-12
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 74 4e-12
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 73 5e-12
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 73 6e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 73 6e-12
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 73 8e-12
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 72 1e-11
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 71 3e-11
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 69 8e-11
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 69 1e-10
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 68 2e-10
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 67 3e-10
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 67 3e-10
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 66 1e-09
UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46; N... 65 1e-09
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 64 3e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 64 4e-09
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 64 4e-09
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 63 7e-09
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 63 7e-09
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 62 9e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 62 1e-08
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 61 2e-08
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 61 2e-08
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 61 3e-08
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 60 4e-08
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 60 5e-08
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 60 6e-08
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 59 8e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 59 1e-07
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 58 1e-07
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 58 3e-07
UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21; Pro... 57 3e-07
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 57 4e-07
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 2e-06
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 54 3e-06
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 54 4e-06
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 52 1e-05
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 52 1e-05
UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71; P... 51 3e-05
UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyc... 50 5e-05
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 48 3e-04
UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79; Pte... 47 4e-04
UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21; A... 46 6e-04
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 46 8e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 8e-04
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 46 0.001
UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39; Aph... 45 0.001
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 44 0.003
UniRef50_Q6RHX4 Cluster: Cytochrome c oxidase subunit I; n=26; E... 42 0.018
UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4; Tali... 41 0.024
UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14; Neo... 41 0.031
UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5; Euma... 40 0.041
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 39 0.095
UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvi... 36 0.88
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 36 1.2
UniRef50_Q94ZM7 Cluster: COI protein; n=2; Sessilia|Rep: COI pro... 36 1.2
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 33 4.7
UniRef50_Q699N2 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 33 6.2
UniRef50_A0MG43 Cluster: NADH-ubiquinone oxidoreductase chain 5;... 33 8.2
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 144 bits (350), Expect = 1e-33
Identities = 69/87 (79%), Positives = 76/87 (87%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FTVG+D+DTRAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L LGFVFLFTV
Sbjct: 204 HMFTVGMDVDTRAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTV 263
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGLTGV+LANSSIDI LHDTYYVV F
Sbjct: 264 GGLTGVVLANSSIDIVLHDTYYVVAHF 290
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFF 408
+HFHYVLS +PLFTG++L ++ LKIQF +FIGVN+TFF
Sbjct: 288 AHFHYVLSMGAVFAIMAGIVQWFPLFTGVTLNNFFLKIQFIIMFIGVNLTFF 339
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 136 bits (329), Expect = 5e-31
Identities = 59/87 (67%), Positives = 76/87 (87%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L LGF+FLFTV
Sbjct: 291 HMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTV 350
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGLTG++LANSS+DI LHDTYYVV F
Sbjct: 351 GGLTGIVLANSSLDIVLHDTYYVVAHF 377
Score = 106 bits (255), Expect = 4e-22
Identities = 48/86 (55%), Positives = 62/86 (72%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVLS + +PLF+G +L KI F +FIGVN+TFFPQHFLGL+
Sbjct: 375 AHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLS 434
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYI 510
G+PRRYSDYPD+Y + NI+SS+GS+I
Sbjct: 435 GMPRRYSDYPDAYTTWNILSSVGSFI 460
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 136 bits (328), Expect = 6e-31
Identities = 61/87 (70%), Positives = 75/87 (86%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L LGF+FLFTV
Sbjct: 56 HMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTV 115
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGLTG+ILANSS+DI LHDTYYVV F
Sbjct: 116 GGLTGIILANSSLDIVLHDTYYVVAHF 142
Score = 33.1 bits (72), Expect = 6.2
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFI 387
+HFHYVLS + +PLF+G +L + KI F +F+
Sbjct: 140 AHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLHNTWTKIHFGVMFM 184
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 135 bits (327), Expect = 8e-31
Identities = 61/87 (70%), Positives = 74/87 (85%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTV
Sbjct: 291 HMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTV 350
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGLTG++LANSSIDI LHDTYYVV F
Sbjct: 351 GGLTGIVLANSSIDIVLHDTYYVVAHF 377
Score = 104 bits (249), Expect = 2e-21
Identities = 48/86 (55%), Positives = 59/86 (68%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVLS + +PLFTG +L KI F +FIGVN+TFFPQHFLGLA
Sbjct: 375 AHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLHDTWTKIHFGVMFIGVNLTFFPQHFLGLA 434
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYI 510
G+PRRYSDYPD+Y N +SS+GS +
Sbjct: 435 GMPRRYSDYPDAYTLWNTVSSIGSLV 460
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 134 bits (325), Expect = 1e-30
Identities = 60/87 (68%), Positives = 74/87 (85%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTV
Sbjct: 291 HMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTV 350
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGLTG++LANSS+DI LHDTYYVV F
Sbjct: 351 GGLTGIVLANSSLDIVLHDTYYVVAHF 377
Score = 106 bits (255), Expect = 4e-22
Identities = 50/86 (58%), Positives = 60/86 (69%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVLS + +PLFTG +L S KI F +FIGVN+TFFPQHFLGLA
Sbjct: 375 AHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLNSVWTKIHFGVMFIGVNLTFFPQHFLGLA 434
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYI 510
G+PRRYSDYPD+Y N +SS+GS I
Sbjct: 435 GMPRRYSDYPDAYALWNTVSSIGSLI 460
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 134 bits (323), Expect = 2e-30
Identities = 63/81 (77%), Positives = 72/81 (88%)
Frame = +2
Query: 20 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 199
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 200 ILANSSIDITLHDTYYVVVIF 262
+LANSS+DI LHDTYYVV F
Sbjct: 61 VLANSSLDIVLHDTYYVVAHF 81
Score = 59.7 bits (138), Expect = 6e-08
Identities = 33/68 (48%), Positives = 40/68 (58%)
Frame = +3
Query: 288 ICNYWGIY*LISFIYRPFIKXLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRL 467
IC Y IY L+ FI K L KNSIF NI+ K+NIF TF S + ST+ LS L
Sbjct: 91 ICYYVSIYPLMPFINWVINKPLMIKNSIFNNIFSCKFNIFPPTFLSISRDASTMLWLSWL 150
Query: 468 IYFMKYNF 491
I +KY+F
Sbjct: 151 ILLLKYHF 158
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 130 bits (313), Expect = 4e-29
Identities = 57/87 (65%), Positives = 75/87 (86%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P++L LGFVF+FT+
Sbjct: 291 HMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFTI 350
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGL+GV+LAN+S+DI HDTYYVV F
Sbjct: 351 GGLSGVVLANASLDIAFHDTYYVVAHF 377
Score = 86.6 bits (205), Expect = 5e-16
Identities = 42/86 (48%), Positives = 50/86 (58%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVLS P GL K F+ +F GVN+TFFPQHFLGL
Sbjct: 375 AHFHYVLSMGAVFALFSGWYFWIPKILGLDYNLLYSKAHFWVLFTGVNLTFFPQHFLGLQ 434
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYI 510
G+PRR SDYPD++ N ISS+GS I
Sbjct: 435 GMPRRISDYPDAFTGWNFISSIGSII 460
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 129 bits (312), Expect = 5e-29
Identities = 57/87 (65%), Positives = 73/87 (83%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FTVG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ + + + LGFVFLFT+
Sbjct: 268 HMFTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFWALGFVFLFTL 327
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGLTG++LANSSID+ LHDTYYVV F
Sbjct: 328 GGLTGIVLANSSIDVVLHDTYYVVAHF 354
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 129 bits (311), Expect = 7e-29
Identities = 58/87 (66%), Positives = 72/87 (82%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FTVG+D+DTRAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L +GF+FLFT+
Sbjct: 293 HMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTI 352
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGLTG++LANS +DI LHDTYYVV F
Sbjct: 353 GGLTGIVLANSGLDIALHDTYYVVAHF 379
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/86 (45%), Positives = 49/86 (56%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVLS G + + +I F+ F GVN+TFFP HFLGL+
Sbjct: 377 AHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLS 436
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYI 510
G+PRR DYPD+Y N +SS GSYI
Sbjct: 437 GMPRRIPDYPDAYAGWNALSSFGSYI 462
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 126 bits (305), Expect = 4e-28
Identities = 57/87 (65%), Positives = 72/87 (82%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FT+G+D+DTRAYFTSAT+IIA+PTGIKIF +AT G ++ N IL +GF+FLFTV
Sbjct: 275 HMFTIGMDVDTRAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFLFTV 334
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGLTGV+L+NSS+D+ LHDTYY V F
Sbjct: 335 GGLTGVVLSNSSVDVVLHDTYYGVAHF 361
Score = 105 bits (252), Expect = 1e-21
Identities = 47/86 (54%), Positives = 58/86 (67%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVLS +P+F GL + Y LKI F+ FIGVN+ FFPQHFLGL+
Sbjct: 359 AHFHYVLSMGAVFSILGGFIYWFPMFFGLMMNEYFLKIHFYLTFIGVNLIFFPQHFLGLS 418
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYI 510
G+PRRYSDYPD Y++ N+ SS GS I
Sbjct: 419 GMPRRYSDYPDMYLNWNLFSSFGSLI 444
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 124 bits (298), Expect = 3e-27
Identities = 56/87 (64%), Positives = 72/87 (82%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H++TVG+D+DTRAYFT+AT+IIAVPTGIKIF +ATI I+ +L +GF+FLFT+
Sbjct: 298 HMYTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFTI 357
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGLTG++LANS +DI+LHDTYYVV F
Sbjct: 358 GGLTGIVLANSGLDISLHDTYYVVAHF 384
Score = 89.0 bits (211), Expect = 9e-17
Identities = 42/89 (47%), Positives = 54/89 (60%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVLS + TGL + +I F++ FIGVN+TF P HFLGLA
Sbjct: 382 AHFHYVLSMGAVFAIFAGFYYWFGKITGLQYPETLGQIHFWSTFIGVNLTFMPMHFLGLA 441
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYILYY 519
G+PRR DYPD+Y N+I+S GSYI +
Sbjct: 442 GMPRRIPDYPDAYAGWNLIASYGSYIALF 470
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 120 bits (288), Expect = 4e-26
Identities = 56/89 (62%), Positives = 72/89 (80%), Gaps = 2/89 (2%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN--YNPNIL*RLGFVFLF 175
H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N + + LGF+FLF
Sbjct: 256 HMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWALGFIFLF 315
Query: 176 TVGGLTGVILANSSIDITLHDTYYVVVIF 262
T+GGLTG++L+NSS+DI LHDTYYVV F
Sbjct: 316 TIGGLTGIVLSNSSLDILLHDTYYVVAHF 344
Score = 87.4 bits (207), Expect = 3e-16
Identities = 43/86 (50%), Positives = 53/86 (61%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVLS + TG + I F+ +F+GVNITFFPQHFLGLA
Sbjct: 342 AHFHYVLSMGAVFAIFGGFYLWFGKITGYAYKDIYGLIHFWLMFLGVNITFFPQHFLGLA 401
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYI 510
G+PRRY+DYPD++ N ISS GS I
Sbjct: 402 GLPRRYADYPDNFEDFNQISSFGSII 427
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 119 bits (287), Expect = 6e-26
Identities = 77/158 (48%), Positives = 91/158 (57%), Gaps = 4/158 (2%)
Frame = +2
Query: 23 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 202
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGGPN--- 57
Query: 203 LANSSIDITLH--DTYYV--VVIFIMFXXXXXXXXXXXXXXXXXXXXXAFH*XLIY*KFN 370
+N S+ I + Y++ ++IFIMF F KFN
Sbjct: 58 WSNFSLFINWYCSSRYHIMLLLIFIMFFQLGLYLLLYQDSFIDTHYLQDFLLMQNDLKFN 117
Query: 371 FLQYLLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI 484
Y LE I HF HNIF EYLDDIQI + E+
Sbjct: 118 LQLYFLELILHFSHNIFLDLPEYLDDIQIFLMDLIVEM 155
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 118 bits (285), Expect = 1e-25
Identities = 52/87 (59%), Positives = 71/87 (81%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H++TVG+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++ +L LGFV +FT+
Sbjct: 317 HMYTVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFTI 376
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGL+GV+LAN+S +I HDTYYVV F
Sbjct: 377 GGLSGVVLANASENIAFHDTYYVVAHF 403
Score = 91.9 bits (218), Expect = 1e-17
Identities = 45/86 (52%), Positives = 54/86 (62%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVLS P GLS + KI F+ +FIGVN+TFFPQHFLGL
Sbjct: 401 AHFHYVLSMGAVFALFSGWYFWIPKIIGLSYDTKASKIHFWILFIGVNLTFFPQHFLGLQ 460
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYI 510
G+PRR SDYPD++ N+ISS GS I
Sbjct: 461 GMPRRISDYPDAFEGWNLISSFGSII 486
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 116 bits (279), Expect = 5e-25
Identities = 55/83 (66%), Positives = 66/83 (79%)
Frame = +2
Query: 14 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 193
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 194 GVILANSSIDITLHDTYYVVVIF 262
G++LANSS+DI LHDTYYVV F
Sbjct: 356 GIVLANSSLDIALHDTYYVVAHF 378
Score = 100 bits (239), Expect = 4e-20
Identities = 47/86 (54%), Positives = 58/86 (67%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVLS + +PLFTG +L + K F +F GVN+TFFPQHFLGLA
Sbjct: 376 AHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNNAWAKAHFGVMFTGVNLTFFPQHFLGLA 435
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYI 510
G+PRRYSDYPD+Y N +SS+GS I
Sbjct: 436 GMPRRYSDYPDAYTLWNTMSSIGSLI 461
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 114 bits (275), Expect = 2e-24
Identities = 50/84 (59%), Positives = 68/84 (80%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FTVG+D D+RAYF+ A++IIA+PTG KIF LATI+G + + +L +GF+ LFT+
Sbjct: 308 HMFTVGLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFTI 367
Query: 182 GGLTGVILANSSIDITLHDTYYVV 253
GG+TGV++ANSS+DI HDTYYVV
Sbjct: 368 GGVTGVVIANSSLDIMFHDTYYVV 391
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 113 bits (271), Expect = 5e-24
Identities = 51/82 (62%), Positives = 66/82 (80%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT++G + +L LGF+ LFT+
Sbjct: 290 HMYAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTI 349
Query: 182 GGLTGVILANSSIDITLHDTYY 247
GGLTGVILAN+S+D+ LHD Y
Sbjct: 350 GGLTGVILANASLDVALHDLKY 371
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 112 bits (270), Expect = 6e-24
Identities = 50/87 (57%), Positives = 67/87 (77%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FT G+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++ ++ LGF+FLFTV
Sbjct: 333 HMFTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLFTV 392
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GG+TGV+LAN +D LHDTYYVV F
Sbjct: 393 GGVTGVVLANGGVDDVLHDTYYVVAHF 419
Score = 76.6 bits (180), Expect = 5e-13
Identities = 35/87 (40%), Positives = 51/87 (58%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVLS +P +G ++ ++ F+ F GVN+ FFP HFLGL+
Sbjct: 417 AHFHYVLSLGAVFGLFAGFYYWFPKMSGKMYNEFLGQLHFWVFFAGVNLLFFPMHFLGLS 476
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYIL 513
G+PRRY DYP+++ N I+S G I+
Sbjct: 477 GMPRRYPDYPEAFAYWNGIASHGYEIM 503
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 112 bits (270), Expect = 6e-24
Identities = 58/98 (59%), Positives = 71/98 (72%), Gaps = 14/98 (14%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT+
Sbjct: 350 HMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFTI 409
Query: 182 GGL--------------TGVILANSSIDITLHDTYYVV 253
GGL +GV+LAN+S+DI HDTYYVV
Sbjct: 410 GGLLNHLLWKINKFRFVSGVVLANASLDIAFHDTYYVV 447
Score = 91.5 bits (217), Expect = 2e-17
Identities = 45/104 (43%), Positives = 57/104 (54%)
Frame = +1
Query: 199 NFSQFFXXXXXXXXLLCSSHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFT 378
N+ F +L HFHYVLS P G + + K+QF+
Sbjct: 464 NYKDFLATDYMLETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQFWL 523
Query: 379 IFIGVNITFFPQHFLGLAGIPRRYSDYPDSYIS*NIISSLGSYI 510
+FIGVN TFFPQHFLGL G+PRR SDYPD++ N+ISS GS +
Sbjct: 524 LFIGVNATFFPQHFLGLQGMPRRISDYPDAFAGWNLISSFGSIV 567
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 107 bits (257), Expect = 2e-22
Identities = 49/79 (62%), Positives = 63/79 (79%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H++ VG+D DTRAYFTSAT+IIA+PTGIKIF LATI+G I ++ + F+FLFTV
Sbjct: 291 HMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFTV 350
Query: 182 GGLTGVILANSSIDITLHD 238
GGLTGV+LAN+S+D+ HD
Sbjct: 351 GGLTGVVLANASLDVAFHD 369
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 107 bits (256), Expect = 3e-22
Identities = 51/90 (56%), Positives = 68/90 (75%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG---TQINYNPNIL*RLGFVFL 172
H+F G+DIDTRAYFT+AT++IAVPTG+K+F LATI G + + +P+ +G V L
Sbjct: 294 HMFVAGLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVLL 353
Query: 173 FTVGGLTGVILANSSIDITLHDTYYVVVIF 262
FT+GGLTGVILAN+++ LHD+YYVV F
Sbjct: 354 FTIGGLTGVILANAALSTLLHDSYYVVAHF 383
Score = 77.4 bits (182), Expect = 3e-13
Identities = 36/88 (40%), Positives = 48/88 (54%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVLS +P +TG+ ++ F FIGVN TFFP H++GL
Sbjct: 381 AHFHYVLSMGAVFAIFGGFWFWFPFWTGMVPRKDLVLTHFMLTFIGVNFTFFPMHWMGLT 440
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYILY 516
G+PRRY DYPD + IS+ G + Y
Sbjct: 441 GMPRRYQDYPDIHSVWQAISTTGGFCSY 468
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 104 bits (249), Expect = 2e-21
Identities = 47/87 (54%), Positives = 63/87 (72%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H++T G+DIDTR YF++AT+IIA+P+ +KIF L T G+ P F+FLFTV
Sbjct: 301 HMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFTV 360
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGL+G+IL+ +S+DI LHDTYYVV F
Sbjct: 361 GGLSGIILSAASLDIILHDTYYVVAHF 387
Score = 79.4 bits (187), Expect = 7e-14
Identities = 38/88 (43%), Positives = 48/88 (54%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHY LS P G+S S ++ F F+G N+TFFP HF GL
Sbjct: 385 AHFHYTLSLGAIYGIFCGFCLWLPYMYGISFDSVMMMAVFVCFFVGTNMTFFPMHFAGLQ 444
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYILY 516
G+PR+ DYPD Y + IISSLGS I +
Sbjct: 445 GMPRKILDYPDCYSTFQIISSLGSVITF 472
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 102 bits (244), Expect = 9e-21
Identities = 47/85 (55%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNPNIL*RLGFVFLFT 178
H++T GID T+AYFT+AT++IA+PTGIK+F +AT+ G I Y P GFV LFT
Sbjct: 294 HMYTSGIDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLFT 352
Query: 179 VGGLTGVILANSSIDITLHDTYYVV 253
+GG+TG+IL+N+ ID ++HDT+YVV
Sbjct: 353 IGGITGIILSNAGIDTSIHDTHYVV 377
Score = 79.0 bits (186), Expect = 1e-13
Identities = 38/88 (43%), Positives = 49/88 (55%)
Frame = +1
Query: 256 HFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLAG 435
HFHYVLS + TGLS + + F+ FIGVN TFFP HFLG G
Sbjct: 379 HFHYVLSMGAVFAIYGGFYYWWGKMTGLSYSESLGQAHFWMTFIGVNFTFFPMHFLGSGG 438
Query: 436 IPRRYSDYPDSYIS*NIISSLGSYILYY 519
+PRR DYPD Y N ++S G++I ++
Sbjct: 439 MPRRIPDYPDMYQYHNTLASFGAFISFF 466
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 101 bits (242), Expect = 2e-20
Identities = 48/86 (55%), Positives = 58/86 (67%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVLS + +PLFTG +L S K F +F GVN+TFFPQHFLGLA
Sbjct: 376 AHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNSAWAKAHFGVMFTGVNLTFFPQHFLGLA 435
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYI 510
G+PRRYSDYPD+Y N +SS+GS I
Sbjct: 436 GMPRRYSDYPDAYTLWNTMSSIGSLI 461
Score = 83.4 bits (197), Expect = 4e-15
Identities = 37/54 (68%), Positives = 45/54 (83%)
Frame = +2
Query: 101 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVVIF 262
LAT+HG I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVV F
Sbjct: 325 LATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHF 378
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 97.5 bits (232), Expect = 3e-19
Identities = 44/87 (50%), Positives = 63/87 (72%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H++TVG+ + +AYF AT++IAVPTGIKIF +AT+ I++ ++ LGF+FLFT+
Sbjct: 396 HMYTVGMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLFTL 455
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GG TG+IL+ + +D HDTYYVV F
Sbjct: 456 GGTTGIILSQAGVDRAYHDTYYVVAHF 482
Score = 80.2 bits (189), Expect = 4e-14
Identities = 36/88 (40%), Positives = 51/88 (57%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYV+S +G + ++ F+ FIG NITFFPQHFLG
Sbjct: 480 AHFHYVMSLGAVFGIFAAVYYWIGKMSGRQYPEWAGQVHFWVFFIGTNITFFPQHFLGRQ 539
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYILY 516
G+PRRY DYPD++ N +SS+G++I +
Sbjct: 540 GMPRRYIDYPDAFALWNYVSSIGAFISF 567
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 95.9 bits (228), Expect = 8e-19
Identities = 45/88 (51%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLFT 178
H++T G+DIDTR+YFT+AT+IIAVPTGIKIF L++ + ++ N ++ F+ F
Sbjct: 274 HMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIVSFA 333
Query: 179 VGGLTGVILANSSIDITLHDTYYVVVIF 262
+GG +G+IL+N+S+D LHDTYYVV F
Sbjct: 334 IGGTSGIILSNASVDHYLHDTYYVVAHF 361
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 95.5 bits (227), Expect = 1e-18
Identities = 43/88 (48%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN-YNPNIL*RLGFVFLFT 178
H++T G+++DTRAYFTS TI+I++PTG K+F + T + + + L L F+ FT
Sbjct: 296 HMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTFT 355
Query: 179 VGGLTGVILANSSIDITLHDTYYVVVIF 262
GG TGVIL N++ID+ LHDTYYV+ F
Sbjct: 356 FGGTTGVILGNAAIDVALHDTYYVIAHF 383
Score = 56.4 bits (130), Expect = 6e-07
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIF-IGVNITFFPQHFLGL 429
+HFH+VLS F G +L + I + +F +GV +TF P HFLG
Sbjct: 381 AHFHFVLSIGAIIGLFTTVSAFQDNFFGKNLRENSIVILWSMLFFVGVILTFLPMHFLGF 440
Query: 430 AGIPRRYSDYPDSYIS*NIISSLGS 504
+PRR DYPD+ N+I S+GS
Sbjct: 441 NVMPRRIPDYPDALNGWNMICSIGS 465
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 95.1 bits (226), Expect = 1e-18
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +2
Query: 41 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 202
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P+IL LGFVFLFTVGGLTGVI
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 93.5 bits (222), Expect = 4e-18
Identities = 44/88 (50%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Frame = +2
Query: 5 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFT 178
++T G+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFT 59
Query: 179 VGGLTGVILANSSIDITLHDTYYVVVIF 262
GG TGVIL N +ID+ LHDTYYV+ F
Sbjct: 60 FGGTTGVILGNGAIDVALHDTYYVIAHF 87
Score = 57.2 bits (132), Expect = 3e-07
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLX-SYILKIQFFTIFIGVNITFFPQHFLGL 429
+HFH+VLS F G +L + I+ + F+GV +TF P HFLG
Sbjct: 85 AHFHFVLSIGAIIALFTSVSFFQESFFGKTLRENTIIVLWSILFFVGVVLTFLPMHFLGF 144
Query: 430 AGIPRRYSDYPDSYIS*NIISSLGS 504
+PRR DYPD+ N+I S+GS
Sbjct: 145 NVMPRRIPDYPDALNGWNMICSIGS 169
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 90.6 bits (215), Expect = 3e-17
Identities = 43/88 (48%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP-NIL*RLGFVFLFT 178
H+ TVG++ DTRAYF++ TI+IA+PTG KIF L T + ++ L F+ LFT
Sbjct: 4 HMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILLFT 63
Query: 179 VGGLTGVILANSSIDITLHDTYYVVVIF 262
+GG TGV++ N+ +DI LHDTYY+V F
Sbjct: 64 LGGTTGVVMGNAGMDIALHDTYYIVAHF 91
Score = 39.1 bits (87), Expect = 0.095
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +1
Query: 358 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPDSYIS*NIISSLGS 504
L I F + + F P H LG +PRR DYPD N S+GS
Sbjct: 132 LNIWFVVFLASIMLIFLPMHILGFNVMPRRIPDYPDYLCYINTWCSIGS 180
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 89.8 bits (213), Expect = 5e-17
Identities = 39/87 (44%), Positives = 62/87 (71%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FTVG+D+DTR YF+SAT++IA+PT IK+F + + + + + F+ +F +
Sbjct: 48 HMFTVGLDVDTRVYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFLL 106
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GG+TG++LANS +D+ +HD+YYVV F
Sbjct: 107 GGVTGLVLANSEVDLVMHDSYYVVAHF 133
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/87 (27%), Positives = 42/87 (48%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVLS + + L +G +++L++Q + G F+ H G
Sbjct: 131 AHFHYVLSLGAVFGLLNGVLSCHELCSGYRSAAWLLRVQVVLLVWGTTCIFWGMHLSGTL 190
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYIL 513
G+PRR D PD Y+ + ++ G ++
Sbjct: 191 GLPRRVPDAPDGYLGTVVSTTCGILVV 217
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 85.0 bits (201), Expect = 1e-15
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLFT 178
H+F VG D T +F+S T+II VPTGIK+F L ++ + +P + +GF+FLFT
Sbjct: 381 HMFMVGFDSLTGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIFLFT 440
Query: 179 VGGLTGVILANSSIDITLHDTYYVVVIF 262
VGG+TGV L+ S++DI HDT++VV F
Sbjct: 441 VGGVTGVALSASALDILFHDTWFVVAHF 468
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/86 (38%), Positives = 46/86 (53%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVLS +P G SL Y+L+ + +G N+ FFP H+LG+
Sbjct: 466 AHFHYVLSLGSYSSIVIMLVWWWPFIVGYSLNKYLLQGHWLLSMVGFNLCFFPMHYLGIH 525
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYI 510
G+PRR S Y Y N+ISS+G +
Sbjct: 526 GLPRRVSCYDQEYYWVNVISSIGGVL 551
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 83.0 bits (196), Expect = 6e-15
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = +1
Query: 361 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPDSYIS*NIISSLGSYI 510
KI F +F+GVN+TFFPQHFLGLAG+PRRYSDYPD+Y N +SSLGS I
Sbjct: 400 KIHFGVMFVGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTVSSLGSLI 449
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 81.8 bits (193), Expect = 1e-14
Identities = 40/87 (45%), Positives = 54/87 (62%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FT G+ A F AT+ IA+PTGIKIF L TI G + Y +L + F+ F +
Sbjct: 299 HMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVL 358
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GG+TGV+LA ++ D HDTY+VV F
Sbjct: 359 GGVTGVMLAAAAADYQFHDTYFVVAHF 385
Score = 57.6 bits (133), Expect = 3e-07
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYV+ +P G L + KI F FIG ++TFF QHF+GL
Sbjct: 383 AHFHYVIIGGVVFGLLAGVHFWWPKMFGKILHETMGKISFVLFFIGFHLTFFIQHFVGLM 442
Query: 433 GIPRR-YSDYPDSYI-S*NIISSLGSYIL 513
G+PRR Y+ P + + N+IS++G++ +
Sbjct: 443 GMPRRVYTFLPGQGLETGNLISTIGAFFM 471
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLFT 178
H+FTVG+DID+R+YF+ AT II++PT +K+F + T G N + F+ F
Sbjct: 300 HMFTVGLDIDSRSYFSIATSIISIPTSVKMFSYINTWASGRGFRGNNSSWSFFSFLICFC 359
Query: 179 VGGLTGVILANSSIDITLHDTYYVV 253
GG TG++L++ S+DI LHDTY+VV
Sbjct: 360 FGGFTGLLLSSGSLDIMLHDTYFVV 384
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/88 (26%), Positives = 38/88 (43%)
Frame = +1
Query: 256 HFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLAG 435
HFH VLS P+ S+ F + +G + F+P H GL+G
Sbjct: 386 HFHTVLSLAATFGLLIAHYFFLPIIFSYSIFESFSFYHTFLLLVGALLVFYPMHLAGLSG 445
Query: 436 IPRRYSDYPDSYIS*NIISSLGSYILYY 519
+ RR +Y D +I + G+++L +
Sbjct: 446 MARRVPEYADIFIPFMTVGFHGTFLLIF 473
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 81.0 bits (191), Expect = 2e-14
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FT G R +F + T++IAVPTGIKIF T+ G +I N +L GF+ F +
Sbjct: 301 HMFTSGTPGWLRMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSFMI 360
Query: 182 GGLTGVILANSSIDITLHDTYYVV 253
GGLTGV++A+ DI +HDTY+VV
Sbjct: 361 GGLTGVMVASVPFDIHVHDTYFVV 384
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/86 (34%), Positives = 47/86 (54%)
Frame = +1
Query: 256 HFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLAG 435
HFHYVL + +P TG + + ++ F FIG+N+TF P H LGL G
Sbjct: 386 HFHYVLFGGSAFALFSGVYHWFPKMTGRMVNEPLGRLHFILTFIGMNLTFMPMHELGLMG 445
Query: 436 IPRRYSDYPDSYIS*NIISSLGSYIL 513
+ RR + Y + N++S++G+Y+L
Sbjct: 446 MNRRIALYDVEFQPLNVLSTIGAYVL 471
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 80.2 bits (189), Expect = 4e-14
Identities = 39/87 (44%), Positives = 56/87 (64%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FTVG+ + F+ T+ IAVPTG+KIF L+T+ G QI + +L +GF+ FT+
Sbjct: 310 HMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASFTI 369
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGL+G + A + D HDTY+VV F
Sbjct: 370 GGLSGFMHAAAPSDAQQHDTYFVVAHF 396
Score = 48.4 bits (110), Expect = 2e-04
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVL + +P G L + + F IF G + FP H LGL
Sbjct: 394 AHFHYVLIGGSIFAILSGIHHWFPKVFGRMLDERLGRWSFALIFTGFHTFAFPFHILGLL 453
Query: 433 GIPRRYSDYPD--SYIS*NIISSLGSYIL 513
G+PRR Y + + N++S++G +IL
Sbjct: 454 GMPRRIYTYAPGLGWENWNLLSTVGVFIL 482
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 80.2 bits (189), Expect = 4e-14
Identities = 35/84 (41%), Positives = 56/84 (66%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F VG+D+D+RAYF +I+I +PT +K+F + + T + + + F+F+F +
Sbjct: 293 HMFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLI 352
Query: 182 GGLTGVILANSSIDITLHDTYYVV 253
G +TG+ L+N IDI LHDTY+VV
Sbjct: 353 GAVTGLFLSNVGIDIMLHDTYFVV 376
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/73 (36%), Positives = 37/73 (50%)
Frame = +1
Query: 256 HFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLAG 435
HFHYVLS + + + L + + T+FIG N+ FFP H LG+
Sbjct: 378 HFHYVLSLGAVVGFFTGFIHFLAKWLPIELYLFWMFYFISTLFIGSNMLFFPMHSLGMYA 437
Query: 436 IPRRYSDYPDSYI 474
PRR SDYP S++
Sbjct: 438 FPRRISDYPVSFL 450
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 79.0 bits (186), Expect = 1e-13
Identities = 35/87 (40%), Positives = 57/87 (65%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H FT+G + A+F AT+II++PTG+K+F L TI+ ++ + IL LGF+ F++
Sbjct: 335 HFFTMGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLGFMVTFSI 394
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GG+TGV+LA D LH++ +++ F
Sbjct: 395 GGMTGVLLAVPGADYVLHNSLFLIAHF 421
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/90 (42%), Positives = 63/90 (70%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVFL 172
H+FT GI + +F++A++ +A+P+GI++F +ATI ++ + P++ LGF+F+
Sbjct: 316 HMFTTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLFI 374
Query: 173 FTVGGLTGVILANSSIDITLHDTYYVVVIF 262
FTVGG+TGV++A ID +HDTY+VV F
Sbjct: 375 FTVGGVTGVMVALVPIDFQVHDTYFVVAHF 404
Score = 66.9 bits (156), Expect = 4e-10
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVL P F+ L + + F+ +FIG N+TFFP H GL
Sbjct: 402 AHFHYVLIGGMVFPLFATFYYWIPAFSRNMLSERLGRWVFWLMFIGFNVTFFPMHMAGLL 461
Query: 433 GIPRRYSDYPD--SYIS*NIISSLGSYIL 513
G+PRR YPD + + N++S++GSYIL
Sbjct: 462 GMPRRVRTYPDGLGWNALNMVSTVGSYIL 490
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/84 (42%), Positives = 57/84 (67%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F VG+ A+F +A+ +IAVPTG+KIF LAT+ +N ++L +GF+ +F +
Sbjct: 308 HMFAVGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFII 367
Query: 182 GGLTGVILANSSIDITLHDTYYVV 253
GG++GV LA+ I++ D+YYVV
Sbjct: 368 GGISGVTLASPPINVQQTDSYYVV 391
Score = 54.0 bits (124), Expect = 3e-06
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+H HYVL +P TG L + K QF+ + I N+TFFP H G A
Sbjct: 392 AHMHYVLFGGAIQGIFAGIFYWFPKMTGRMLDERLGKWQFWLMLISFNLTFFPMHLSGNA 451
Query: 433 GIPRRYSDYPD--SYIS*NIISSLGSYIL 513
G+PRR Y + N+IS+ GS +L
Sbjct: 452 GMPRRIYTYEADMGWNLWNLISTTGSLLL 480
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 77.8 bits (183), Expect = 2e-13
Identities = 33/87 (37%), Positives = 55/87 (63%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H FT+G +F AT++I++PTG+K+F L TI+ ++ + I+ LGF+ F++
Sbjct: 334 HFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFSI 393
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GG+TGV+LA D LH++ +V+ F
Sbjct: 394 GGMTGVLLAVPGADFVLHNSLFVIAHF 420
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 77.4 bits (182), Expect = 3e-13
Identities = 35/87 (40%), Positives = 55/87 (63%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F VG+ + +F +++IA+PTGIK+F AT+ G +I +N ++ + F+ F +
Sbjct: 309 HMFAVGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQFVI 368
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGLTG++ A ID L DTY+VV F
Sbjct: 369 GGLTGIMFAAVPIDWQLTDTYFVVAHF 395
Score = 57.2 bits (132), Expect = 3e-07
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVL +P TG L I +QF+ +G N+TF QHFLGL
Sbjct: 393 AHFHYVLIGGLVFALFSAAYYWFPKMTGRMLNERIGILQFWLWVLGFNMTFMVQHFLGLM 452
Query: 433 GIPRRYSDYPDS--YIS*NIISSLGSYIL 513
G+PRR Y D+ + N I++LG+ +
Sbjct: 453 GMPRRVYTYADNPGWAMLNGIATLGAIFM 481
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 77.0 bits (181), Expect = 4e-13
Identities = 36/87 (41%), Positives = 55/87 (63%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F G++ + F T+IIAVP+ +K F + T+ I + P ++ +G V +F
Sbjct: 352 HMFVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFSIGLVSMFIS 411
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GG+TG+IL N+++DI LHDTYYVV F
Sbjct: 412 GGVTGIILGNNAMDIQLHDTYYVVAHF 438
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFH V+ + +P G + + I F+ F+G + FFP H++G+A
Sbjct: 436 AHFHLVMGSASFFGMMAGVYHWFPKMFGRMMDEKLGYIHFWFTFVGAYLVFFPMHYIGIA 495
Query: 433 GIPRRY-----SDYPDSYIS*NIISSLGSYILYY 519
G PRRY D+ S+ N S+ + I +
Sbjct: 496 GFPRRYYAFTNFDFTKSFTDLNAFISIAAIITVF 529
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 76.6 bits (180), Expect = 5e-13
Identities = 32/87 (36%), Positives = 56/87 (64%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F G++ F AT++IA+P+ +K F L T++G ++ + +L L FV +F +
Sbjct: 339 HMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFVI 398
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGL+G+ +A + +DI +HDTY++V F
Sbjct: 399 GGLSGIFMAATPVDIVIHDTYFIVAHF 425
Score = 46.4 bits (105), Expect = 6e-04
Identities = 25/68 (36%), Positives = 31/68 (45%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVL +P G + KI F FI +N TFF H LG+
Sbjct: 423 AHFHYVLFAGTAMAVFGSIYFWFPKMFGRMMNETAGKIHFALTFIFLNGTFFTMHILGVG 482
Query: 433 GIPRRYSD 456
G PRR +D
Sbjct: 483 GFPRRLAD 490
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 76.6 bits (180), Expect = 5e-13
Identities = 42/81 (51%), Positives = 48/81 (59%)
Frame = +3
Query: 255 SFSLCSINRSSICNYWGIY*LISFIYRPFIKXLYTKNSIFYNIYWSKYNIFSTTFFRFSW 434
SFSLC I S CNY GIY L+ I K L KNSIFYNI+ K IFSTTFF S
Sbjct: 79 SFSLCFIYSSCFCNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFFSISS 138
Query: 435 NTSTIFRLSRLIYFMKYNFFI 497
+T T+ S LI +KY+ I
Sbjct: 139 DTPTMLSFSSLIQLLKYHLKI 159
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 26 IDTRAYFTSATIIIAVPTGIKIFR*LAT 109
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 75.8 bits (178), Expect = 9e-13
Identities = 35/84 (41%), Positives = 54/84 (64%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FT GID R+ F + ++ I++P+ +K+F + T+ ++ +L +GFV F +
Sbjct: 344 HMFTTGIDPRIRSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAPMLFCIGFVQNFII 403
Query: 182 GGLTGVILANSSIDITLHDTYYVV 253
GG+TGV LA ID+ LHDTYYVV
Sbjct: 404 GGVTGVFLAVIPIDLILHDTYYVV 427
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/86 (24%), Positives = 43/86 (50%)
Frame = +1
Query: 256 HFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLAG 435
HFH+++ +P+ TG + F+T +G N TF +LG G
Sbjct: 429 HFHFIVYGAIGFALFAASYYWFPMVTGRMYQKRLAHAHFWTALVGSNATFLAMLWLGYGG 488
Query: 436 IPRRYSDYPDSYIS*NIISSLGSYIL 513
+PRRY+ Y + + + ++++G++++
Sbjct: 489 MPRRYATYIPQFATAHRLATVGAFLI 514
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 75.4 bits (177), Expect = 1e-12
Identities = 33/87 (37%), Positives = 57/87 (65%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H FT+G +F++AT+++ +PTG+K+F T+ ++ + P +L LG +FL V
Sbjct: 353 HFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALFLLLV 412
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGLTG++LA +I+ T+H++ +VV F
Sbjct: 413 GGLTGMMLAIPAINYTVHNSVFVVAHF 439
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/87 (40%), Positives = 54/87 (62%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FTVG + F T +IAVPTG+K+F + T+ G ++ + LGF+F F +
Sbjct: 300 HMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLL 359
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GG+TGV+L+ + +D HD+Y+VV F
Sbjct: 360 GGITGVMLSMTPLDYQFHDSYFVVAHF 386
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFH VL +P TG + ++ F+ +G +TF PQ+ LG
Sbjct: 384 AHFHNVLMAGSGFGAFAGLYYWWPKMTGRMYDERLGRLHFWLFLVGYLLTFLPQYALGYL 443
Query: 433 GIPRRYSDYP---DSYIS*NIISSLGSYIL 513
G+PRRY Y + N++S++G+YIL
Sbjct: 444 GMPRRYYTYNADIAGWPELNLLSTIGAYIL 473
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/84 (42%), Positives = 55/84 (65%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F G+ TR F+ T++IAVPTGIKIF + T++ I++ +L LG VF+F +
Sbjct: 246 HMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVFMFLI 305
Query: 182 GGLTGVILANSSIDITLHDTYYVV 253
GGLTG+ L +ID+ + D+ +VV
Sbjct: 306 GGLTGLPLGMVAIDLGVSDSLFVV 329
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 241 LLCSSHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHF 420
L HFHYVL + +PL TG + K+ F+ IF G NI +F Q
Sbjct: 326 LFVVGHFHYVLGMAITLGILGAVIHWFPLATGKYYPENLGKLSFWLIFAGANIFYFLQMV 385
Query: 421 LGLAGIPRRYSDYP--DSYIS*NIISSLGSYIL 513
G+ G PRRY DYP + + ++I ++G+ IL
Sbjct: 386 AGMLGNPRRYPDYPPIPEWTTLHVIQTIGALIL 418
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/87 (39%), Positives = 58/87 (66%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FT G+ +FT+++ +IA+P+G++IF +AT+ G++ +L LGF +F +
Sbjct: 312 HMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFII 371
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGL+GV++A+ D+ HDTY+VV F
Sbjct: 372 GGLSGVMVASVPFDMQAHDTYFVVAHF 398
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/71 (42%), Positives = 37/71 (52%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVL YP FTG + + K+ F+ F G N+TFFP H LGL
Sbjct: 396 AHFHYVLIGGAVFPLLGGLYYWYPKFTGRMMSERLGKVAFWVTFAGFNLTFFPMHKLGLE 455
Query: 433 GIPRRYSDYPD 465
G+PRR Y D
Sbjct: 456 GMPRRVYTYLD 466
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/87 (40%), Positives = 56/87 (64%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F G+ ++FT++++ IAVP G++IF LATI + + L +GF+ +F +
Sbjct: 306 HMFVAGLPRLGESFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFVI 365
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGLTGV++A+ D +HDTY+VV F
Sbjct: 366 GGLTGVMVASVPFDTQVHDTYFVVAHF 392
Score = 55.2 bits (127), Expect = 1e-06
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYVL +P TG + + + F IF G N+TFFP H LGL
Sbjct: 390 AHFHYVLVGGAVFPLLGAIYYWFPKLTGRMMSETLGRWSFGLIFSGFNLTFFPMHILGLQ 449
Query: 433 GIPRR-YSDYPD-SYIS*NIISSLGSYIL 513
G+PRR Y+ P+ + N+ SL +L
Sbjct: 450 GMPRRIYTYQPEMPWSGLNMFISLSGIVL 478
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 73.3 bits (172), Expect = 5e-12
Identities = 33/87 (37%), Positives = 56/87 (64%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H FT+G ++F+ T+ I++PTG+KIF L T++ +I++ +L L F+ F +
Sbjct: 330 HFFTMGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPNFVI 389
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GG+TGV+LA ++ D H+TY++V F
Sbjct: 390 GGVTGVMLAMAAADYQYHNTYFLVSHF 416
Score = 63.3 bits (147), Expect = 5e-09
Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
SHFHYVL YP G L I K F+ IG NI FFPQ+FLGL
Sbjct: 414 SHFHYVLIAGTVFACFAGFIFWYPKMFGHKLNERIGKWFFWIFMIGFNICFFPQYFLGLQ 473
Query: 433 GIPRRYSDY--PDSYIS*NIISSLGSYIL 513
G+PRR Y D + + N IS++G++++
Sbjct: 474 GMPRRIYTYGPNDGWTTLNFISTVGAFMM 502
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 72.9 bits (171), Expect = 6e-12
Identities = 41/79 (51%), Positives = 47/79 (59%)
Frame = +3
Query: 255 SFSLCSINRSSICNYWGIY*LISFIYRPFIKXLYTKNSIFYNIYWSKYNIFSTTFFRFSW 434
SF L S N SSICNY IY L+ + F K KNSI+ NIY SK NIFS TFF
Sbjct: 79 SFPLRSFNSSSICNYISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSNIFSPTFFSACR 138
Query: 435 NTSTIFRLSRLIYFMKYNF 491
+T +F SRLI +KY F
Sbjct: 139 DTPPLFWFSRLILLLKYYF 157
Score = 41.1 bits (92), Expect = 0.024
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +1
Query: 91 F*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXLLCSSHF 261
F MT Y +W++N L P + FC FI+ N +FSQF LLC S F
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQFLNWYYSTWYLLCCSSF 80
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F G+D RA F + ++ IAVP+ +K F + T+ I +L +GFV F +
Sbjct: 375 HMFATGLDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPMLFSVGFVANFIL 434
Query: 182 GGLTGVILANSSIDITLHDTYYVV 253
GG+TGV LA+ +D+ LH TYYVV
Sbjct: 435 GGVTGVFLASIPVDLVLHATYYVV 458
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/86 (34%), Positives = 45/86 (52%)
Frame = +1
Query: 256 HFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLAG 435
HFHY++ +PL+TG + K+ F+ IG NITFF LG G
Sbjct: 460 HFHYIVMGAIAFAGFAGIYYWFPLYTGRMYQRTLGKMHFWLSMIGTNITFFAMILLGYGG 519
Query: 436 IPRRYSDYPDSYIS*NIISSLGSYIL 513
+PRRY+ Y + + + I++LG+ IL
Sbjct: 520 MPRRYATYLPQFATLHQITTLGALIL 545
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 72.5 bits (170), Expect = 8e-12
Identities = 33/84 (39%), Positives = 52/84 (61%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FT D R AT+ +A+P+G+K+F +AT++G +I +L L F+ F V
Sbjct: 300 HMFTAVQDFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFFIV 359
Query: 182 GGLTGVILANSSIDITLHDTYYVV 253
GG+TGV ++D+ LHDTY+V+
Sbjct: 360 GGVTGVFFPVITLDLHLHDTYFVL 383
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 71.7 bits (168), Expect = 1e-11
Identities = 32/87 (36%), Positives = 56/87 (64%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H FT+G A F A+++I +PTG+KI+ + T+ +I ++ ++ L F+FLF +
Sbjct: 354 HFFTMGQSGHINAVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFVI 413
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GG+TG++LAN +D +H+T ++V F
Sbjct: 414 GGITGIMLANPILDYQVHNTVFLVAHF 440
Score = 34.7 bits (76), Expect = 2.0
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFH ++ +P G L +I + G FFP + LGL
Sbjct: 438 AHFHNMVVPGVLFGMLAGYTFWFPKAFGFRLDERWGRISAYCWIFGWMGAFFPLYILGLM 497
Query: 433 GIPRRYSDYPD-SYIS*NIISSLGSYIL 513
G+PRR Y SY+ I++ +G+ ++
Sbjct: 498 GLPRRSVAYEQASYVPLEIVAFVGALLV 525
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/87 (37%), Positives = 54/87 (62%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FT G++ F +T++IA+P+ IK F ATI G ++ +N L + F+ +F V
Sbjct: 342 HMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCIAFLSMFIV 401
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGL+G+ +A +D+ HDTY++V F
Sbjct: 402 GGLSGIFMAAVPVDVYFHDTYFIVAHF 428
Score = 58.4 bits (135), Expect = 1e-07
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHY+L +P G + + K F FIG N TFFP HFLG+
Sbjct: 426 AHFHYILFGATLFGVFAGIQFWFPKMFGRMMNEKLGKTHFVLTFIGANGTFFPMHFLGMQ 485
Query: 433 GIPRRYSD-YPDSYI 474
G+PRRY+D Y Y+
Sbjct: 486 GMPRRYADPYLHGYL 500
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 69.3 bits (162), Expect = 8e-11
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = +3
Query: 561 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 668
NQRI LFSLN+PSSIE YQNLPPAEHSYNELPIL N
Sbjct: 451 NQRIILFSLNMPSSIEWYQNLPPAEHSYNELPILSN 486
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/84 (38%), Positives = 52/84 (61%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H++ G+ R T++I++P G+ + + T++G I++ +L LGF+FLF +
Sbjct: 291 HLYVTGMPDWLRVGQMVTTVLISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFLI 350
Query: 182 GGLTGVILANSSIDITLHDTYYVV 253
GGLTGV LA S+ + L +TYYVV
Sbjct: 351 GGLTGVPLALVSLTVHLSETYYVV 374
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/68 (36%), Positives = 34/68 (50%)
Frame = +1
Query: 256 HFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLAG 435
HFHYV++ +P TG I K F+ F+GVNI F+ +G+ G
Sbjct: 376 HFHYVMAVAGTFAIFGGVYYIFPKMTGKMYNETIGKWAFWITFVGVNIVFWIMMDIGVEG 435
Query: 436 IPRRYSDY 459
+PRRY DY
Sbjct: 436 MPRRYYDY 443
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/84 (36%), Positives = 56/84 (66%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F G+ I + + F++A+ ++AVPTG++IF +AT+ + + LGF+F+F +
Sbjct: 332 HMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFVL 391
Query: 182 GGLTGVILANSSIDITLHDTYYVV 253
GG+TGV++A ++ HD+Y+VV
Sbjct: 392 GGMTGVMVAAVPFNLQAHDSYFVV 415
Score = 54.4 bits (125), Expect = 2e-06
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+H HYVL P FTG + + K F+ +F G N+ FF H G+
Sbjct: 416 AHLHYVLIGGMVFPMFGALYYWVPHFTGRMMSERLGKWVFWLMFSGFNLAFFMMHLTGMR 475
Query: 433 GIPRRYSDYPD--SYIS*NIISSLGSYIL 513
G+PRR + YP + N++S++G++IL
Sbjct: 476 GMPRRVATYPGGIGWDRLNMLSTIGAFIL 504
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 67.3 bits (157), Expect = 3e-10
Identities = 35/87 (40%), Positives = 50/87 (57%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F VGI + F +T+I+AVPTG+KIF + T+ G +I +GF+F F +
Sbjct: 308 HMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNFLI 367
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GG+TGV L D + +YYVV F
Sbjct: 368 GGITGVSLGMIPFDYQVTMSYYVVAHF 394
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFH V+ +P TG L + F+ IG +TF PQ+ LGL
Sbjct: 392 AHFHNVMMFGTAFLAMAGLYYWWPKMTGRFLDEKVGLAHFWLFMIGSWLTFLPQYILGLL 451
Query: 433 GIPRRYSDYPD---SYIS*NIISSLGSYIL 513
G+PRRY YP ++ N S++G+++L
Sbjct: 452 GMPRRYYTYPAGNWAWTELNFASTVGAFLL 481
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +2
Query: 41 YFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILANSS 217
YFT+ TI+IA+PTG KIF + T+ + I +L + F+ F +GG TGV+L N+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNAG 368
Query: 218 IDITLHDTYYVV 253
ID+ LHDT YVV
Sbjct: 369 IDLALHDTVYVV 380
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 HFHYVLSXXXXXXXXXXXXN*YP-LFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
HFH+VLS L G+ L + + + I V +TF P HF G +
Sbjct: 382 HFHFVLSIGAIISMICFIIYIQRMLLFGIILSNRLSSLIAPIFMISVLLTFLPMHFTGFS 441
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYIL 513
+PRR DYPD N I +LG+ ++
Sbjct: 442 PLPRRIPDYPDEMWGWNFICTLGATMM 468
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/89 (37%), Positives = 51/89 (57%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H++ G+ +F + T+IIA+PT IK++ + T+ I+ +L LGF+ F
Sbjct: 330 HMYVSGMYPYFGFFFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLFALGFIITFVN 389
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIFIM 268
GGLTG+ L N +D+ L DT +VV F M
Sbjct: 390 GGLTGLFLGNVVVDVPLSDTMFVVAHFHM 418
Score = 59.7 bits (138), Expect = 6e-08
Identities = 29/86 (33%), Positives = 42/86 (48%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFH V+ + YP TG L + K F+ F+G + FFP H+LGL
Sbjct: 414 AHFHMVMGVAPIMVVLGAIYHWYPKVTGRMLNDVLGKFHFWVTFLGAYLIFFPMHYLGLL 473
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYI 510
G+PRRY + D+ SL ++I
Sbjct: 474 GVPRRYFELGDAAFIPPSAHSLNAFI 499
>UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46;
Neoptera|Rep: Cytochrome c oxidase subunit I - Eueides
tales
Length = 95
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +3
Query: 561 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 668
NQR+ LFSLN+PSSIE YQN PP+EHSYNELPIL N
Sbjct: 39 NQRMILFSLNMPSSIEWYQNFPPSEHSYNELPILSN 74
Score = 39.9 bits (89), Expect = 0.054
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +1
Query: 448 YSDYPDSYIS*NIISSLGSYI 510
YSDYPD+Y+S NIISS GSYI
Sbjct: 1 YSDYPDNYMSWNIISSFGSYI 21
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/84 (35%), Positives = 54/84 (64%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FT G+ + +F++A+ + +PTGI++F +AT+ ++ +L G + +FT
Sbjct: 332 HMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFTA 391
Query: 182 GGLTGVILANSSIDITLHDTYYVV 253
GGLTGV++A + D +HDTY++V
Sbjct: 392 GGLTGVMVAIAPFDWQVHDTYFIV 415
Score = 56.0 bits (129), Expect = 8e-07
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+H HY L YP+ T +L + + F+ +F G N+TF P H GL
Sbjct: 416 AHLHYTLFGGMVFPIIAGVYYFYPVITKKALSERLGRWSFWLLFTGFNVTFLPMHLTGLK 475
Query: 433 GIPRRYSDYPD--SYIS*NIISSLGSYIL 513
G+PRR YP + N+IS++G++++
Sbjct: 476 GMPRRVFTYPGHVGWDWLNLISTVGAFVM 504
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F G++ + F+ T+II +P + L +++G+++ N L LGF+ +F
Sbjct: 338 HMFVSGMNPLSSLVFSFPTLIITIPATVLTLIWLGSLYGSRLRINSASLFALGFISMFVS 397
Query: 182 GGLTGVILANSSIDITLHDTYYVV 253
GG++G LA SIDI LH TY+VV
Sbjct: 398 GGVSGFFLAQPSIDIYLHATYFVV 421
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +1
Query: 256 HFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLAG 435
HFH V+ +P TG + + KI F+ FIG F P H+LG+ G
Sbjct: 423 HFHLVMGVAAIFGVFAGTYFWFPKMTGHMMNETLGKIHFWGTFIGAYCIFMPFHYLGMVG 482
Query: 436 IPRRYSDYPDSYI 474
RRYS + D ++
Sbjct: 483 NVRRYSSFVDDFL 495
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/87 (32%), Positives = 53/87 (60%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H FT+G + +F+ +T+IIA+PTG+KIF + TI + + + F+ +F++
Sbjct: 329 HFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWFISFIIIFSI 388
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GG +GVIL+ ++D H++ +++ F
Sbjct: 389 GGFSGVILSIPNLDFIFHNSMFLIAHF 415
Score = 34.3 bits (75), Expect = 2.7
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = +1
Query: 361 KIQFFTIF--IGVNITFFPQHFLGLAGIPRRYSDYPD-SYIS*NIISSLGSYIL 513
K F +F IGV +TFFP +FLG G+ RR + Y + + + I+S +GS ++
Sbjct: 447 KFNFNILFWLIGVILTFFPFYFLGYCGMIRRINIYYNIKWKNLLIVSFIGSILI 500
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 62.9 bits (146), Expect = 7e-09
Identities = 33/87 (37%), Positives = 49/87 (56%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F G R F T++IA+PTG+K+F L T+ + N +L +G + F
Sbjct: 316 HMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFIF 375
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
G+TGV+LA IDI + +TY+VV F
Sbjct: 376 AGITGVMLATVPIDIHVGNTYFVVAHF 402
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/87 (32%), Positives = 46/87 (52%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYV+ + +P FTG + K+ F FIG + + P H+ GL
Sbjct: 400 AHFHYVIFNTIVFGVFAGIYHWFPKFTGKMYYEGLGKVHFVLTFIGATLNWLPLHWAGLL 459
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYIL 513
G+PRR + Y + N+I+S+G+++L
Sbjct: 460 GMPRRVASYDPEFAIWNVIASIGAFML 486
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/87 (32%), Positives = 54/87 (62%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H++ VG+D +R +++ TI+I++P IK+ ++ + + L + F+ LF V
Sbjct: 451 HMYLVGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFLV 510
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
G TG+ L++ S+++++HDT+YVV F
Sbjct: 511 AGFTGMWLSHVSLNVSMHDTFYVVAHF 537
Score = 39.5 bits (88), Expect = 0.072
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFH +LS + G+ + G + F PQ +LG +
Sbjct: 535 AHFHIMLSGAAITGIFSGFYYYFNALFGIKFSRMFGYMHLIYYSGGQWVAFVPQFYLGFS 594
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYI 510
G+PRR DYP ++ + +S+ G +I
Sbjct: 595 GMPRRIHDYPVVFMGWHSMSTAGHFI 620
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 62.5 bits (145), Expect = 9e-09
Identities = 31/84 (36%), Positives = 51/84 (60%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FT GI A+F++A+ ++AVPT +++F + T+ + +L L F F +
Sbjct: 306 HMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFVI 365
Query: 182 GGLTGVILANSSIDITLHDTYYVV 253
GGLTGV++A D +HDTY++V
Sbjct: 366 GGLTGVMVAIVPFDWQVHDTYFIV 389
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI----L*RLGFVF 169
H+FT GI + ++F +A+ +A+P+G+++F +AT + I L LGF+F
Sbjct: 375 HMFTTGIPQLSLSFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFLF 434
Query: 170 LFTVGGLTGVILANSSIDITLHDTYYVV 253
+F +GGLTGV++A D HD+Y++V
Sbjct: 435 IFVLGGLTGVMVAVIPFDWQAHDSYFIV 462
Score = 56.4 bits (130), Expect = 6e-07
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+H HYVL P + +L + + F +F+G NITFFP HF GLA
Sbjct: 463 AHLHYVLVGGMVFPLFAAFYYWMPYTSRQALSERLGRWVFGLMFVGFNITFFPMHFTGLA 522
Query: 433 GIPRRYSDYPDSY--IS*NIISSLGSYIL 513
G+PRR Y Y S N +S++G++++
Sbjct: 523 GMPRRVYTYAAGYGWESLNFVSTVGAFMI 551
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/84 (36%), Positives = 51/84 (60%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F GI A+F +A+++I++P+ + +F +ATI + + L GFV +F V
Sbjct: 326 HMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFVV 385
Query: 182 GGLTGVILANSSIDITLHDTYYVV 253
GG++GV+ A +D L DTY+VV
Sbjct: 386 GGVSGVMTAAVPLDWQLTDTYFVV 409
Score = 60.5 bits (140), Expect = 4e-08
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+H HYVL +P FTG + K+ F+ + +G N+ FFP H GL
Sbjct: 410 AHLHYVLLGINVFPVLGGVAYWFPKFTGRMMNERFGKLTFWVVLVGFNLGFFPMHISGLL 469
Query: 433 GIPRRYSDYPD--SYIS*NIISSLGSYI 510
G+PRR YP + + N+++++GS++
Sbjct: 470 GMPRRIYTYPSGMGWDTSNLLTTIGSFV 497
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FT + + ++ T+ IA+P+G+K+ AT++G +I Y + + F+ +F +
Sbjct: 289 HMFTAIDNTLVQIVSSATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFLL 348
Query: 182 GGLTGVILANSSIDITLHDTYYVV 253
GG+TGV ID L+ TY+VV
Sbjct: 349 GGITGVFFPLVPIDYALNGTYFVV 372
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/87 (33%), Positives = 51/87 (58%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F G + +F+ T +I+VPTG+K F + T+ I + ++ +GF+ F
Sbjct: 315 HMFVTGAVL--LPFFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPMIWSVGFMATFLF 372
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGLTG++LA+ +D L D+Y+++ F
Sbjct: 373 GGLTGIMLASPPLDFHLADSYFLIAHF 399
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHY L +P TG + + KI F+ F+G + TF QH++G
Sbjct: 397 AHFHYTLFGTVVFASCAGVYFWFPKMTGRMMDERLGKIHFWLTFVGFHGTFLIQHWVGNM 456
Query: 433 GIPRRYSDYPDS--YIS*NIISSLGSYIL 513
G+PRRY+DY DS + N IS++ S++L
Sbjct: 457 GMPRRYADYLDSDGFTIYNQISTVFSFLL 485
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/87 (33%), Positives = 44/87 (50%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F G F T+I+ V T IK+F + T++ + + GF+F
Sbjct: 316 HMFVSGQSTFAGGLFGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTVF 375
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GG+TG+ L S+D+ HDTY+VV F
Sbjct: 376 GGMTGIALGTVSLDVAWHDTYFVVAHF 402
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/89 (28%), Positives = 43/89 (48%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFH+++ +P G + + I +G N TF PQ LG
Sbjct: 400 AHFHFIMVGATIMAFLAALHYWFPKMFGRTYHEGWGLVAAALIILGFNATFIPQFLLGNN 459
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYILYY 519
G+PRRY +YP+ + + N+ S+ G+ +L +
Sbjct: 460 GMPRRYYEYPERFQALNVASTAGATLLAF 488
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F G+ F T++I++P+ + + + T+ + Y+ +L LG VF+F V
Sbjct: 328 HMFMTGMSPLLGEGFMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFALGTVFVFGV 387
Query: 182 GGLTGVILANSSIDITLHDTYYVV 253
GGLTG+ L + S+D+ LHDT +VV
Sbjct: 388 GGLTGLFLGDISMDLYLHDTMFVV 411
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 59.7 bits (138), Expect = 6e-08
Identities = 29/87 (33%), Positives = 45/87 (51%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+FT G F ++ + + T IK+F AT++ I + GF+F
Sbjct: 309 HMFTSGQSAFNGGVFGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLVF 368
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GG+TG+ LA S+D+ HDTY++V F
Sbjct: 369 GGMTGIALATVSLDVHWHDTYFIVAHF 395
Score = 53.2 bits (122), Expect = 5e-06
Identities = 26/87 (29%), Positives = 41/87 (47%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFH+++ +P G L + I +G N TF PQ LG
Sbjct: 393 AHFHFIMVGATVMAFLAALHYWFPKIAGKRLPEGWGLVAAVMIILGFNFTFIPQFLLGNE 452
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYIL 513
G+PRRY YP+ + + N+ S+ G+ +L
Sbjct: 453 GMPRRYFSYPEKFWALNVASTAGASVL 479
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 142
H++ VG+D DTRAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 291 HMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL*RLGFVFLFT 178
H+FT GI A F++A+ ++AVPT +++F + T+ GT P ++ L F F
Sbjct: 306 HMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP-MMWILAFFATFV 364
Query: 179 VGGLTGVILANSSIDITLHDTYYVV 253
+GGLTGV++A D +HDT+++V
Sbjct: 365 IGGLTGVMVAVVPFDWQVHDTHFIV 389
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL-*RLGFVFLFT 178
H+F VG D+ T +F+S T+II VPTGIK+F L + ++ N I+ +GF+FLFT
Sbjct: 31 HMFMVGFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGFIFLFT 90
Query: 179 VGGLTG 196
+GG G
Sbjct: 91 MGGRQG 96
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/87 (32%), Positives = 47/87 (54%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F GI++ + F + TI I++P + +F + T+ ++ + L LG + LF +
Sbjct: 312 HMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFII 371
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GG+TGV L +D TY+VV F
Sbjct: 372 GGITGVFLGAIVLDYQFRGTYWVVAHF 398
Score = 41.1 bits (92), Expect = 0.024
Identities = 27/87 (31%), Positives = 41/87 (47%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHYV+ YP TG + KIQF F+G N+ +FP F+
Sbjct: 396 AHFHYVMVAGATALFGGLYYW-YPKITGKMYNETLGKIQFGVYFLGFNLLYFPM-FIAWE 453
Query: 433 GIPRRYSDYPDSYIS*NIISSLGSYIL 513
PRR YP+ + ++++G +IL
Sbjct: 454 -TPRRVFVYPEGLQIWHSMATVGGFIL 479
>UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21;
Prodoxidae|Rep: Cytochrome oxidase subunit I - Greya
powelli
Length = 52
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +3
Query: 561 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 668
N+ I LFSLN+ SSIE QN PPAEHSYNELPIL N
Sbjct: 16 NKNIVLFSLNMNSSIEWLQNFPPAEHSYNELPILTN 51
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 56.8 bits (131), Expect = 4e-07
Identities = 28/87 (32%), Positives = 50/87 (57%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F G +I TR +++ TI+I++P + + + T++ ++ Y +L +G + F +
Sbjct: 298 HMFITGTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFAVGALLNFII 357
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GG TGV L + +ID TY+VV F
Sbjct: 358 GGSTGVYLGSIAIDRGFRGTYWVVAHF 384
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHY+L +P TG + + KI F +GV +TF PQ L
Sbjct: 382 AHFHYILVGTVTLGLIAGLYYWWPKITGRTYSERLGKIHFALAMLGVALTFLPQ--FALM 439
Query: 433 GIPRRYSDYP-DSYIS*NIISSLGSYI 510
+PRRY Y ++ N +S+LG++I
Sbjct: 440 DMPRRYFTYDIPEWVPLNQLSTLGAFI 466
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +2
Query: 5 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 94
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +3
Query: 360 KNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 482
KN+IF IYWSK+NIFS+T S NT+T+F LS ++FMK
Sbjct: 328 KNTIFSYIYWSKFNIFSSTLCSISSNTTTLFWLSSCLHFMK 368
Score = 52.4 bits (120), Expect = 1e-05
Identities = 33/71 (46%), Positives = 36/71 (50%)
Frame = +2
Query: 41 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 220
Y SA P G+K F + + G P I F GGLTGVILANSS
Sbjct: 223 YLXSAXXFXXGPPGVK-FLGDSYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSX 281
Query: 221 DITLHDTYYVV 253
DI LHDTYYVV
Sbjct: 282 DIILHDTYYVV 292
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/49 (46%), Positives = 35/49 (71%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 148
H+FTVG+D++T +F+S T+II VPTGIK+F L + +++N IL
Sbjct: 54 HMFTVGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/87 (33%), Positives = 45/87 (51%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H FT D + T T +++PTG + TI G ++ N +L L + F +
Sbjct: 383 HYFTAVSDARMPIFMT-ITETVSIPTGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNFLI 441
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIF 262
GGLTG+ A+ D+ LH+TY+V+ F
Sbjct: 442 GGLTGIFNADVPADLQLHNTYWVIAHF 468
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/90 (28%), Positives = 46/90 (51%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H+F G+ + F T+ + + +F +AT+ +I ++ ++ +G + LF
Sbjct: 292 HMFATGMSFTEKTVFMLGTLAAVPASAMHVFNFVATMWNGRIRFDSPMMWSIGGIALFFS 351
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIFIMF 271
G GV+ A +D T HDTY+VV F +F
Sbjct: 352 AGAGGVLNAAMPLDFTTHDTYWVVGHFHLF 381
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +1
Query: 256 HFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLAG 435
HFH + +P TG + KI F F+G + FF QH LG+ G
Sbjct: 377 HFHLFVMGTIAFGSIGFFYYMFPFVTGRMYNEKLGKIHFVFSFVGAVLLFFTQHILGIYG 436
Query: 436 IPRRYSDYP--DSYIS*NIISSLGSYIL 513
+PRR DYP +I+ N I+++G+ ++
Sbjct: 437 MPRRVYDYPPIPEWIAMNQIATVGAMLI 464
>UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71;
Pancrustacea|Rep: Cytochrome c oxidase subunit I -
Psilochaeta pampiana
Length = 76
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +3
Query: 564 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 668
QR+ LFS+ L SSIE QN PPAEHSY+ELP+L N
Sbjct: 41 QRMVLFSIQLCSSIEWLQNSPPAEHSYSELPLLTN 75
>UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyche
norvegica|Rep: Cytochrome oxidase subunit I - Psyche
norvegica
Length = 63
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +3
Query: 564 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 668
QRI LF N+ SSIE +QN PPA HSY+E+PIL N
Sbjct: 28 QRILLFPSNMTSSIEWFQNTPPANHSYDEMPILIN 62
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/43 (58%), Positives = 28/43 (65%)
Frame = +1
Query: 532 Y*LLFENQ*LTNELTYFL*ISHHQLNDIKIYHQQNIHIMNYQF 660
Y LLFENQ EL Y + LND KIY QQ+IH+MNYQF
Sbjct: 465 YSLLFENQSFITELLYLPSMYLLLLNDTKIYLQQSIHMMNYQF 507
Score = 39.5 bits (88), Expect = 0.072
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +2
Query: 356 Y*KFNFLQYLLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI*FLH 496
Y KFNFL Y E I F NIF LEYLDDI IIQ EI F H
Sbjct: 406 YSKFNFLLYSSELISLFSLNIFSGSLEYLDDILIIQILTSLEISFHH 452
Score = 38.3 bits (85), Expect = 0.17
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +3
Query: 87 KFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED 188
KFL D +MELKLI+ L FYED L FY Q ED
Sbjct: 316 KFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSED 349
>UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79;
Pterygota|Rep: Cytochrome oxidase subunit I -
Biopyrellia bipuncta
Length = 68
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +3
Query: 561 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 668
+QR +F + L SS+E QN PPAEHSYNELP+L N
Sbjct: 32 SQRQVIFPVQLNSSMEWLQNTPPAEHSYNELPLLVN 67
>UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21;
Aphidomorpha|Rep: Cytochrome c oxidase subunit I -
Phylloxera sp. DAD-2001a
Length = 83
Score = 46.4 bits (105), Expect = 6e-04
Identities = 19/29 (65%), Positives = 26/29 (89%)
Frame = +1
Query: 424 GLAGIPRRYSDYPDSYIS*NIISSLGSYI 510
GL G+PRRYSDYP++Y++ NI+SS+GS I
Sbjct: 1 GLNGMPRRYSDYPNNYLTWNIMSSIGSMI 29
Score = 37.1 bits (82), Expect = 0.38
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 564 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPIL 662
+++ +F LNL +SI N+PP H+Y+ELP++
Sbjct: 48 KKMTIFKLNLNNSIGWIHNMPPIGHTYSELPLI 80
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 46.0 bits (104), Expect = 8e-04
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Frame = +1
Query: 250 SSHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSY-ILKIQFFTIFIGVNITFFPQHFLG 426
+ HFH + + + +P TG +L +++ Q + FIG+ +T FP H++G
Sbjct: 364 TGHFHLIFAGAIVTMYFAIAYDLWPHLTGRALTHVRLMRWQLWLWFIGMIVTTFPWHWVG 423
Query: 427 LAGIPRR--YSDYPDSYIS*NII----SSLGSYIL 513
+ G+PRR Y DY D ++ + S++G IL
Sbjct: 424 ILGMPRRMAYYDYGDPALAAQAVWVAMSAIGGLIL 458
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 46.0 bits (104), Expect = 8e-04
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 118
H+F VG D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 55 HMFMVGYDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/90 (32%), Positives = 44/90 (48%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 181
H F GI + T I++PT + I +AT+ G + + IL L F +
Sbjct: 319 HTFMTGIVFAWLMADSIFTETISIPTSMLIVGLIATMIGGRHKFQTPILFALAASTSFMI 378
Query: 182 GGLTGVILANSSIDITLHDTYYVVVIFIMF 271
GG++GV ++ +ID +H YYVV F F
Sbjct: 379 GGVSGVTQSSLAIDTIVHGDYYVVAHFHYF 408
Score = 39.1 bits (87), Expect = 0.095
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 253 SHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILKIQFFTIFIGVNITFFPQHFLGLA 432
+HFHY + +P FTG + +I + + GVNI +FP F L
Sbjct: 403 AHFHYFMVGVAVMGLMGNLYYYFPKFTGRMYSEKLGRIHWAFAYPGVNILYFPMFF--LY 460
Query: 433 GIPRRYSDYPD--SYIS*NIISSLGSYI 510
+PRR Y Y N I++ G++I
Sbjct: 461 DLPRRVYTYQSGFGYTIFNEIATAGAFI 488
>UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39;
Aphidoidea|Rep: Cytochrome oxidase subunit I - Pemphigus
microsetosus
Length = 68
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +3
Query: 564 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 668
+++ +F LNL +SIE NLPP EHSY+ELP++ N
Sbjct: 33 KKMVMFKLNLNNSIEWIHNLPPLEHSYSELPLVTN 67
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 44.4 bits (100), Expect = 0.003
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = -1
Query: 267 IMKMTTT**VSCNVISIEELAKIXXXXXXXXXXXXXXNLHKILGL*L-I*VPCIVASHLK 91
+MKM+ T VS N SI E +H ++G VP + +H K
Sbjct: 1 MMKMSNTNQVSWNKASITEAESTIPVTPPMVKSTXNPIIHHMIGSHSRSRVPASMYNHEK 60
Query: 90 ILIPVGTAIIIVAEVKYARVSISIPTVNI 4
LIPVGT +I+V E+K V S PTVN+
Sbjct: 61 TLIPVGTPMIMVTELKKTAVPKSSPTVNM 89
>UniRef50_Q6RHX4 Cluster: Cytochrome c oxidase subunit I; n=26;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Partamona helleri
Length = 88
Score = 41.5 bits (93), Expect = 0.018
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1
Query: 436 IPRRYSDYPDSYIS*NIISSLGSYI 510
+PRRYSDYPDSY N ISS+GS I
Sbjct: 2 MPRRYSDYPDSYYCWNFISSMGSMI 26
>UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4;
Talitridae|Rep: Cytochrome oxidase subunit I - Talitrus
saltator
Length = 59
Score = 41.1 bits (92), Expect = 0.024
Identities = 14/36 (38%), Positives = 28/36 (77%)
Frame = +3
Query: 561 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 668
++R+ +F +++P+S+E + PPA+HSY++ P+L N
Sbjct: 23 SKRVYMFHMHMPTSLEWHHPSPPADHSYDDTPLLTN 58
>UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14;
Neoptera|Rep: Cytochrome oxidase subunit I - Kalotermes
flavicollis
Length = 57
Score = 40.7 bits (91), Expect = 0.031
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +3
Query: 561 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPIL 662
N++I LF +SIE QNLPPAEHSY+ELP +
Sbjct: 21 NRQI-LFPTQTSNSIEWIQNLPPAEHSYSELPTI 53
>UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5;
Eumalacostraca|Rep: Cytochrome oxidase subunit I -
Paguristes turgidus
Length = 68
Score = 40.3 bits (90), Expect = 0.041
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +3
Query: 576 LFSLNLPSSIE*YQNLPPAEHSYNELPILRN 668
+FSL+L SSIE + PPA+HSY E+P++ N
Sbjct: 37 MFSLSLASSIEWEHSYPPADHSYMEIPMISN 67
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 39.1 bits (87), Expect = 0.095
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = +2
Query: 2 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL--- 172
H+ T + +D RA+ T +T+++A +G+ + TI T Y+ LG FL
Sbjct: 55 HLQTFPLPVDLRAWITVSTLVLASGSGLTVLNLGLTIL-TSKGYDYKD--PLGMTFLIAL 111
Query: 173 --FTVGGLTGVILANSSIDITLHDTYYVV 253
F +GG+ + L + I+ +H+TYYVV
Sbjct: 112 IGFIIGGVQALPLPINIINGVVHNTYYVV 140
>UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvirus
'L'|Rep: AMV085 - Amsacta moorei entomopoxvirus (AmEPV)
Length = 204
Score = 35.9 bits (79), Expect = 0.88
Identities = 17/65 (26%), Positives = 37/65 (56%)
Frame = +3
Query: 279 RSSICNYWGIY*LISFIYRPFIKXLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRL 458
++ + N G+Y +I Y+ + LY K IF +I++ KYN++ + + +N + F +
Sbjct: 10 KTMVLNNDGLYDIIP--YKASLSILYNKKIIFNDIFFIKYNLYESRVDKKKFNNAISFLM 67
Query: 459 SRLIY 473
++ I+
Sbjct: 68 NKNIF 72
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 35.5 bits (78), Expect = 1.2
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +1
Query: 256 HFHYVLSXXXXXXXXXXXXN*YPLFTGLSLXSYILK-IQFFTIFIGVNITFFPQHFLGLA 432
HFH + + +P G L S L +Q + FIG+ I P H LGL
Sbjct: 368 HFHLIFAGTVITMYLAVAYKLWPELCGRRLYSVDLALVQLWGWFIGMVIMTTPWHILGLL 427
Query: 433 GIPRRYS 453
G PRR S
Sbjct: 428 GQPRRIS 434
>UniRef50_Q94ZM7 Cluster: COI protein; n=2; Sessilia|Rep: COI
protein - Balanus crenatus
Length = 58
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 561 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELP 656
+QR +FS NL S++E PP HSY+ELP
Sbjct: 22 SQRPTIFSPNLSSNLEWVHTTPPHYHSYDELP 53
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 33.5 bits (73), Expect = 4.7
Identities = 11/27 (40%), Positives = 22/27 (81%)
Frame = +2
Query: 170 LFTVGGLTGVILANSSIDITLHDTYYV 250
LF +GG+TG++ A+ ++++ +H+T YV
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYV 380
>UniRef50_Q699N2 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Schizaphis graminum|Rep: NADH-ubiquinone
oxidoreductase chain 5 - Schizaphis graminum (Aphid)
Length = 556
Score = 33.1 bits (72), Expect = 6.2
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +3
Query: 291 CNYWGIY*LISFIYRPFIKXLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLI 470
C ++ L+S PF Y+K+ IF N F FF FS+ + + + +
Sbjct: 322 CGLIFMFTLMSLCGFPFFCSFYSKDLIFEYFLMMNLNFFFFFFFLFSFLLTFFYSIRVIY 381
Query: 471 YFMKYNF 491
Y M NF
Sbjct: 382 YLMMMNF 388
>UniRef50_A0MG43 Cluster: NADH-ubiquinone oxidoreductase chain 5;
n=1; Nymphon gracile|Rep: NADH-ubiquinone oxidoreductase
chain 5 - Nymphon gracile
Length = 558
Score = 32.7 bits (71), Expect = 8.2
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 336 PFIKXLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMKYNFF 494
PF+ Y+K+ I + + YN+F S N+ T+F RL+ F+ FF
Sbjct: 343 PFLASFYSKHLILDSFIFMDYNMFMLLVLYIS-NSMTLFYSLRLVKFLGSRFF 394
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,789,247
Number of Sequences: 1657284
Number of extensions: 7496884
Number of successful extensions: 17658
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 17002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17615
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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