Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1353
(657 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 109 8e-23
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 93 7e-18
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 92 9e-18
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 91 2e-17
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 85 1e-15
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 70 6e-11
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 63 7e-09
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 62 1e-08
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 54 2e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 52 2e-05
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 48 3e-04
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 45 0.002
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 45 0.002
UniRef50_A6MBK8 Cluster: Odorranain-E1 antimicrobial peptide; n=... 44 0.003
UniRef50_Q02940 Cluster: Beta-lactamase precursor; n=1; Burkhold... 42 0.013
UniRef50_Q5CDC4 Cluster: LacOPZ-alpha peptide from pUC9; n=1; Cr... 36 0.65
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 34 3.5
UniRef50_Q47167 Cluster: D-serine deaminase activator; n=3; Esch... 33 4.6
UniRef50_Q1ZUF3 Cluster: Chaperone protein DnaJ; n=5; Vibrionace... 33 4.6
UniRef50_Q9ASW8 Cluster: At1g54460/F20D21_28; n=3; Arabidopsis t... 33 4.6
UniRef50_Q9VA38 Cluster: CG12072-PA; n=5; Sophophora|Rep: CG1207... 33 4.6
UniRef50_Q47H51 Cluster: NUDIX hydrolase; n=1; Dechloromonas aro... 33 6.0
UniRef50_Q6CFH8 Cluster: Yarrowia lipolytica chromosome B of str... 33 6.0
UniRef50_Q4T4V4 Cluster: Chromosome 3 SCAF9531, whole genome sho... 33 8.0
UniRef50_Q49222 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
UniRef50_A7DCV0 Cluster: Triphosphoribosyl-dephospho-CoA protein... 33 8.0
UniRef50_A4S743 Cluster: Predicted protein; n=2; Ostreococcus|Re... 33 8.0
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 109 bits (261), Expect = 8e-23
Identities = 52/68 (76%), Positives = 55/68 (80%)
Frame = +1
Query: 454 RYQAFPPGSSLVRSPVPTRRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSLAVCTN 633
R+ P +L+ P RLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPS AVCTN
Sbjct: 47 RFPLEAPSCALLFRPC---RLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTN 103
Query: 634 PPFSPTAA 657
PPFSPTAA
Sbjct: 104 PPFSPTAA 111
Score = 107 bits (258), Expect = 2e-22
Identities = 56/78 (71%), Positives = 59/78 (75%)
Frame = +2
Query: 329 SKRPGTVKRPRCWRXSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 508
SK+ T R R SIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 509 AAYRIPVRLSPFGKRGAF 562
R+P PF R A+
Sbjct: 62 C--RLPDTCPPFSLREAW 77
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 92.7 bits (220), Expect = 7e-18
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +1
Query: 64 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 186
MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 92.3 bits (219), Expect = 9e-18
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = +2
Query: 347 VKRPRCWRXSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 508
V+ PR R SIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 91.5 bits (217), Expect = 2e-17
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = +2
Query: 353 RPRCWRXSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPAAYRIPVR 532
RPR R SIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P + +PV
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP--FGLPVS 135
Query: 533 LSPFGKRGAF 562
+G+ +F
Sbjct: 136 FRCYGRGFSF 145
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = +3
Query: 162 RGEAVCVLGALPLPRSLTRCARSFGCGERYQSLKGGNTVIHRIRG*RRKEHVSKRPAK 335
R +C G +PLPRSLTR ARSFGCGERY+ G + R KE + R ++
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTDGDGNFLEDTRKTLSKEEIRPRRSR 83
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 85.0 bits (201), Expect = 1e-15
Identities = 46/80 (57%), Positives = 51/80 (63%)
Frame = +3
Query: 3 RSQFHTTYEPEA*SVMPGVPNE*ANSH*LRCAHCPLSSRETCRASCINESANARGEAVCV 182
RSQ HTTYEP+ V GV A + HCP S+R+T RASCI + A AR EAV V
Sbjct: 221 RSQSHTTYEPDDWMVQLGVLVASAPYYWSLRVHCPFSTRDTWRASCIRDPATARSEAVWV 280
Query: 183 LGALPLPRSLTRCARSFGCG 242
L ALPL RS TRC RS GCG
Sbjct: 281 LVALPLLRSRTRCVRSVGCG 300
Score = 32.7 bits (71), Expect = 8.0
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = +1
Query: 1 SAHNSTQHTSRKHKV*CLGCLMSELTHINCVALTARFPVGKPVVPAALMNRPTRGERR 174
S H ST TSR+ V LGC H + P P + A +RP R RR
Sbjct: 417 SVHTSTHQTSRRQHVSSLGCSCVHGAHEHGQPQPPGLPERPPQLAAPWAHRPARRARR 474
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 69.7 bits (163), Expect = 6e-11
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = -1
Query: 657 RSGRAERGVRAHSQAWSERPTPN*DTYSVSYEKAPRFPK 541
RS RAERGVRA+S AWSERP P+ DT SVSYEKAPRFPK
Sbjct: 20 RSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPK 58
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 62.9 bits (146), Expect = 7e-09
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 510 PLTGYLSAFLPSGSVALSHSSRCRYLSSV 596
PLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 9 PLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = -3
Query: 208 ERGSGRAPNTQTASPRALADSLMQLARQVSRLESGQ 101
+R + APNTQTASPRALADSLMQLARQVSRLESGQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQLARQVSRLESGQ 360
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = +1
Query: 529 PPFSLREAWRFLIAHAVGISVRCRSFAPSLAVCTNPPFSPTAA 657
PPFSL + + GIS RCRSFAPS AV NPPFSPTAA
Sbjct: 59 PPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSPTAA 101
Score = 37.1 bits (82), Expect = 0.37
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 450 IKIPGVSPWKLPRALSCSDPPLTGY-LSAFLPSGSVALSHSS 572
+KI VS LP ALSCS+P ++ + F +GSVALSHSS
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSS 73
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/77 (36%), Positives = 42/77 (54%)
Frame = +2
Query: 278 YPQNQGITQERTCEQKASKRPGTVKRPRCWRXSIGSAPLTSITKIDAQVRGGETRQDYKD 457
+P+N I +R + + + P T S PLT+ITKI Q + +T+ +YK
Sbjct: 38 HPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKY 97
Query: 458 TRRFPLEAPSCALLFRP 508
T FPL++PS +LLF P
Sbjct: 98 TTPFPLQSPSYSLLFPP 114
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = -1
Query: 657 RSGRAERGVRAHSQAWSERPTPN 589
RSGRAERGVRAHS AWSERPTPN
Sbjct: 20 RSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = -3
Query: 337 PFAGLLLTCSFLRYPLILWITVLPPLSD 254
P LLTCSF YPLILWITVLPPLS+
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSE 46
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1
Query: 253 SHSKAVIRLSTESGDNAGKNM 315
+HSKAVIRLSTESGDNAGKNM
Sbjct: 39 AHSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = -1
Query: 657 RSGRAERGVRAHSQAWSERPTPN*DT 580
RS RAERGV A+S AWSERPTP+ DT
Sbjct: 20 RSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_A6MBK8 Cluster: Odorranain-E1 antimicrobial peptide; n=31;
Odorrana grahami|Rep: Odorranain-E1 antimicrobial
peptide - Rana grahami (Yunnanfu frog) (Huia grahami)
Length = 171
Score = 44.0 bits (99), Expect = 0.003
Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = -2
Query: 176 NRLSPRVGRFINAAG-TTGFPTGKRAVSATQLM*VSSLIRHPRHYTLCFRLVCCVE 12
N L R G INAAG T G TG+ AV+A Q+M SL+R PR + F LV C E
Sbjct: 11 NNLFSRGGGRINAAGGTAGLTTGQPAVTAPQIM-GGSLLRRPRRLSSLFLLVVCWE 65
>UniRef50_Q02940 Cluster: Beta-lactamase precursor; n=1;
Burkholderia cepacia|Rep: Beta-lactamase precursor -
Burkholderia cepacia (Pseudomonas cepacia)
Length = 313
Score = 41.9 bits (94), Expect = 0.013
Identities = 22/32 (68%), Positives = 22/32 (68%)
Frame = -1
Query: 99 ERNAINVS*LTH*APQALHFMLPARMLCGIVS 4
ERNAINVS LT MLPARMLCGIVS
Sbjct: 194 ERNAINVSYLTALGTPGFTLMLPARMLCGIVS 225
>UniRef50_Q5CDC4 Cluster: LacOPZ-alpha peptide from pUC9; n=1;
Cryptosporidium hominis|Rep: LacOPZ-alpha peptide from
pUC9 - Cryptosporidium hominis
Length = 128
Score = 36.3 bits (80), Expect = 0.65
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 1 SAHNSTQHTSRKHKV 45
SAHNSTQHTSRKHKV
Sbjct: 114 SAHNSTQHTSRKHKV 128
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 33.9 bits (74), Expect = 3.5
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = -3
Query: 559 SATLPEGRKADRYPVSG---GSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQG 389
S+TL + R + G GS+Q S+ G++P + GFA+ + +F +A G
Sbjct: 562 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 621
Query: 388 GGAYGXTPATRPFYGSWP 335
G + +P + P Y S P
Sbjct: 622 GSSVPPSPYSTPSYLSVP 639
>UniRef50_Q47167 Cluster: D-serine deaminase activator; n=3;
Escherichia coli|Rep: D-serine deaminase activator -
Escherichia coli
Length = 249
Score = 33.5 bits (73), Expect = 4.6
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -3
Query: 133 ARQVSRLESGQ*AQRN*--CELAHSLGTPGITLYASGSYVVWNCER 2
AR +++ + ++RN CELAHSLG TL V WNCER
Sbjct: 134 ARLIAKRTCPERSERNAIKCELAHSLGPDFHTLCFRLLCVCWNCER 179
>UniRef50_Q1ZUF3 Cluster: Chaperone protein DnaJ; n=5;
Vibrionaceae|Rep: Chaperone protein DnaJ - Vibrio
angustum S14
Length = 308
Score = 33.5 bits (73), Expect = 4.6
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = -3
Query: 511 GGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGXTPATRPFYG 344
GG +G FQG G F + G A D+ F +AR G G +G +TRP G
Sbjct: 85 GGGHHGGFQGGFQGGGYGDFEDIFGGAFGDM---FSNARGGRGGFGSRHSTRPQKG 137
>UniRef50_Q9ASW8 Cluster: At1g54460/F20D21_28; n=3; Arabidopsis
thaliana|Rep: At1g54460/F20D21_28 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 338
Score = 33.5 bits (73), Expect = 4.6
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +1
Query: 481 SLVRSPVPTRRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSLAVCTNPPFSPTA 654
S + SP+PTRR+PD E F +A + S+ RSF P + + P FS T+
Sbjct: 118 SQLNSPLPTRRIPD--HKMHHDEEDSFSVASSSATSI--RSFKPKITIGVAPTFSSTS 171
>UniRef50_Q9VA38 Cluster: CG12072-PA; n=5; Sophophora|Rep:
CG12072-PA - Drosophila melanogaster (Fruit fly)
Length = 1105
Score = 33.5 bits (73), Expect = 4.6
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 391 PDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTRRLPDTC 528
P HH ++ SS+ NP G + P G S V P P R P C
Sbjct: 161 PHSHHTHQPSSRTVGNPGGNGGFSPSPSGFSEVAPPAPPPRNPTAC 206
>UniRef50_Q47H51 Cluster: NUDIX hydrolase; n=1; Dechloromonas
aromatica RCB|Rep: NUDIX hydrolase - Dechloromonas
aromatica (strain RCB)
Length = 261
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -3
Query: 463 PGIFIVLSGFATSDLSVDFCDARQGGGAYGXTPATRPFYGS--WPFAGLLLTCSFLRY 296
PG+F L+GF +++ C AR+ G A ++ S WPF L+ F Y
Sbjct: 155 PGVFSALAGFVEPGETLEECAAREVREEVGIEIANLRYFHSQPWPFPNSLMVAFFADY 212
>UniRef50_Q6CFH8 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 779
Score = 33.1 bits (72), Expect = 6.0
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = -3
Query: 628 CTQPSLERTTYTELRYLQREL*ESATLPEGRKADRYPVSGG-------SEQESARGSFQG 470
C P E+ L+Y ++ E L E ++A VS G ESA G+ +G
Sbjct: 45 CVYPEAEKKIVVSLKYWKKLQDEIQQLKEDKRAAERGVSEGFVDGVVDGAVESAGGT-RG 103
Query: 469 ETPGIFIVLSGFA 431
ETPG+ + +SG A
Sbjct: 104 ETPGVVLGVSGLA 116
>UniRef50_Q4T4V4 Cluster: Chromosome 3 SCAF9531, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF9531, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 598
Score = 32.7 bits (71), Expect = 8.0
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = -3
Query: 514 SGGSEQESARGSFQGETPGIFIVLSGFATSDLS-VDFCD-ARQGGGAYGXTPATRPFYGS 341
SG + +E RG+F G + + F+TS S V + G + RPF+ S
Sbjct: 249 SGQAPEEEDRGTFAGVQDSQEVCTTSFSTSPPSQVGYTPLLATASPRVGLLFSFRPFHPS 308
Query: 340 WPFAGLLLTCSFLRYPLILWITVLPPLSD*YRSPQPNDRAQ 218
+ F + C +L P + L P P P+D Q
Sbjct: 309 FHFLTMFFCCLYLLLPQC--VCTLSPSPSKQSKPTPSDSLQ 347
>UniRef50_Q49222 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma genitalium|Rep: Putative uncharacterized
protein - Mycoplasma genitalium
Length = 77
Score = 32.7 bits (71), Expect = 8.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 1 SAHNSTQHTSRKH 39
SAHNSTQHTSRKH
Sbjct: 65 SAHNSTQHTSRKH 77
>UniRef50_A7DCV0 Cluster: Triphosphoribosyl-dephospho-CoA protein;
n=4; Methylobacterium|Rep:
Triphosphoribosyl-dephospho-CoA protein -
Methylobacterium extorquens PA1
Length = 289
Score = 32.7 bits (71), Expect = 8.0
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Frame = -3
Query: 550 LPEGRKADRYPVSGGSEQESAR-GSFQGETPGIFIVLSGFATS-DLSVD---FCDARQGG 386
LP AD Y + +E ++ + G+ G PG +V++ F TS D+S AR G
Sbjct: 9 LPAATVADLYRAACLAELDALKPGNVHGYAPGHRMVVADFVTSADVSAPPLAAAGARVGQ 68
Query: 385 GAYGXTPATRPFYGSWPFAGLLLTCSFLRY 296
G AT G G+LL C+ L Y
Sbjct: 69 RVRGGVEATFAAVGQNTNLGILLLCAPLAY 98
>UniRef50_A4S743 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 572
Score = 32.7 bits (71), Expect = 8.0
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 72 ANSH*LRCAHCPLSSRETCRASCINESANARGEAVC 179
A H C H P++ R CRA+ N A AR E +C
Sbjct: 199 ARDHADVCEHKPVACRHGCRATMTNADAVARHEEIC 234
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,332,769
Number of Sequences: 1657284
Number of extensions: 15060656
Number of successful extensions: 45390
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 42923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45360
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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