Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1353
         (657 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    34   0.51 
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    34   0.51 
BC071898-1|AAH71898.1|  437|Homo sapiens four jointed box 1 (Dro...    31   3.6  
BC049171-1|AAH49171.1|  437|Homo sapiens four jointed box 1 (Dro...    31   3.6  

>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = -3

Query: 559 SATLPEGRKADRYPVSG---GSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQG 389
           S+TL + R      + G   GS+Q S+     G++P    +  GFA+ +   +F +A  G
Sbjct: 561 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 620

Query: 388 GGAYGXTPATRPFYGSWP 335
           G +   +P + P Y S P
Sbjct: 621 GSSVPPSPYSTPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = -3

Query: 559 SATLPEGRKADRYPVSG---GSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQG 389
           S+TL + R      + G   GS+Q S+     G++P    +  GFA+ +   +F +A  G
Sbjct: 562 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 621

Query: 388 GGAYGXTPATRPFYGSWP 335
           G +   +P + P Y S P
Sbjct: 622 GSSVPPSPYSTPSYLSVP 639


>BC071898-1|AAH71898.1|  437|Homo sapiens four jointed box 1
           (Drosophila) protein.
          Length = 437

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 25/69 (36%), Positives = 30/69 (43%)
 Frame = -3

Query: 358 RPFYGSWPFAGLLLTCSFLRYPLILWITVLPPLSD*YRSPQPNDRAQRVSERGSGRAPNT 179
           R   G+   AGL L    L   L LW  +LPP ++   S  P DR  R   R  G AP  
Sbjct: 3   RRMRGAAATAGLWLLA--LGSLLALWGGLLPPRTELPASRPPEDRLPRRPARSGGPAPAP 60

Query: 178 QTASPRALA 152
           +   P  LA
Sbjct: 61  RFPLPPPLA 69


>BC049171-1|AAH49171.1|  437|Homo sapiens four jointed box 1
           (Drosophila) protein.
          Length = 437

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 25/69 (36%), Positives = 30/69 (43%)
 Frame = -3

Query: 358 RPFYGSWPFAGLLLTCSFLRYPLILWITVLPPLSD*YRSPQPNDRAQRVSERGSGRAPNT 179
           R   G+   AGL L    L   L LW  +LPP ++   S  P DR  R   R  G AP  
Sbjct: 3   RRMRGAAATAGLWLLA--LGSLLALWGGLLPPRTELPASRPPEDRLPRRPARSGGPAPAP 60

Query: 178 QTASPRALA 152
           +   P  LA
Sbjct: 61  RFPLPPPLA 69


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,961,439
Number of Sequences: 237096
Number of extensions: 2445575
Number of successful extensions: 11592
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11589
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)