Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1346
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   3.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   3.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   3.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.4  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   9.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
 Frame = +2

Query: 572 YVLLNV--KEEKKSYLIKNNLIQFILKNVI 655
           Y+ +N+  K +K+S L+KN    F+LK V+
Sbjct: 118 YIDINLQNKGKKESKLMKNFYFWFVLKQVM 147


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 497 PNTLCLSRRTLQARSLQILTC 559
           PN+  L+ R L   +L++ TC
Sbjct: 486 PNSCALTTRELPGETLRLFTC 506


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 497 PNTLCLSRRTLQARSLQILTC 559
           PN+  L+ R L   +L++ TC
Sbjct: 493 PNSCALTTRELPGETLRLFTC 513


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 200 CYLAMQHQFRNQSDQCCTQLHR 135
           CYL  Q +F+++  +   Q H+
Sbjct: 228 CYLRRQKRFKDEKKELIRQTHK 249


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 194 DNNAKKVNIKQHVD 235
           D N KK+N+K  +D
Sbjct: 614 DQNVKKINLKHALD 627


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 194 DNNAKKVNIKQHVD 235
           D N KK+N+K  +D
Sbjct: 614 DQNVKKINLKHALD 627


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 536 WLVRSFSRDTMYL 498
           WLV +F+ D +YL
Sbjct: 321 WLVNAFNVDPLYL 333


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,914
Number of Sequences: 336
Number of extensions: 3537
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)