Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1346
         (701 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...   144   3e-36
L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione S-transf...    24   5.3  
AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione S-tran...    24   5.3  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   7.0  

>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score =  144 bits (348), Expect = 3e-36
 Identities = 67/84 (79%), Positives = 74/84 (88%)
 Frame = +1

Query: 256 NHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADTYPIGVHTLPKKLDEE 435
           NHII+LA GRLVNLGCA GHSSFVMSNSFTNQVLAQIELWT  + Y IGVH LPKKLD+E
Sbjct: 334 NHIILLAEGRLVNLGCAMGHSSFVMSNSFTNQVLAQIELWTNREQYAIGVHVLPKKLDDE 393

Query: 436 VAALHLDHLGVKLTKLTPKQAKYI 507
           VAALHLD LGVKLTKL+ +Q +Y+
Sbjct: 394 VAALHLDKLGVKLTKLSARQPEYL 417



 Score =  128 bits (310), Expect = 1e-31
 Identities = 63/94 (67%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
 Frame = +2

Query: 2   NALQAAMEGFQVTTMEEAAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEID 181
           NALQAAMEG +VTTMEEA++  QIFVTTTG  DII  EH L MKDD+IVCNIGHFDCEI+
Sbjct: 248 NALQAAMEGKEVTTMEEASKEAQIFVTTTGCTDIIMGEHFLNMKDDSIVCNIGHFDCEIN 307

Query: 182 VAWLDNNA-KKVNIKQHVDRYELENVTILLFLLQ 280
           V WL  NA +KVNIK  VDRY L N   ++ L +
Sbjct: 308 VTWLQENAVEKVNIKPQVDRYRLANGNHIILLAE 341



 Score = 30.7 bits (66), Expect = 0.046
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +3

Query: 519 EGPYKPDHYRY 551
           EGPYKP+HYRY
Sbjct: 422 EGPYKPEHYRY 432


>L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 341 NELDITKEEWPVAQPKL 291
           +++ IT+EEWP  +P +
Sbjct: 45  DDVRITREEWPALKPTM 61


>AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione
           S-transferase S1-2 protein.
          Length = 195

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 341 NELDITKEEWPVAQPKL 291
           +++ IT+EEWP  +P +
Sbjct: 22  DDVRITREEWPALKPTM 38


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 14/62 (22%), Positives = 27/62 (43%)
 Frame = +1

Query: 355 LAQIELWTKADTYPIGVHTLPKKLDEEVAALHLDHLGVKLTKLTPKQAKYIVSLEKDLTS 534
           L  I  WT      + +  + + + E  +   LD   V + KLT +Q +  V +  ++ S
Sbjct: 331 LVVIGQWTMLPLRTLEMELISQGIAEPNSVRVLDKASVPIVKLTDRQTQVKVDISFNMES 390

Query: 535 QI 540
            +
Sbjct: 391 GV 392


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,508
Number of Sequences: 2352
Number of extensions: 15638
Number of successful extensions: 54
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)