Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1346
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 128 3e-30
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 128 3e-30
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 128 3e-30
U29488-1|AAA68773.2| 338|Caenorhabditis elegans Serpentine rece... 31 1.1
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 30 1.8
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 128 bits (310), Expect = 3e-30
Identities = 62/91 (68%), Positives = 73/91 (80%), Gaps = 3/91 (3%)
Frame = +1
Query: 244 IRKCNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADT---YPIGVHTL 414
++ H+I+LA GRLVNLGCATGH SFVMSNSFTNQVLAQ+ELWTK T Y +G++ L
Sbjct: 332 LKNGRHVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQVELWTKFGTPQEYKLGLYVL 391
Query: 415 PKKLDEEVAALHLDHLGVKLTKLTPKQAKYI 507
PK LDEEVA LHL LGVKLTKL+ +QA Y+
Sbjct: 392 PKTLDEEVAYLHLAQLGVKLTKLSDEQASYL 422
Score = 112 bits (270), Expect = 2e-25
Identities = 55/94 (58%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 NALQAAMEGFQVTTMEEAAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEID 181
NALQAAMEG++VTT+EEAA I VTTTG DI+ +H + +DAIVCN+GHFDCEID
Sbjct: 250 NALQAAMEGYEVTTLEEAAPKANIIVTTTGCKDIVTGKHFELLPNDAIVCNVGHFDCEID 309
Query: 182 VAWLDNNA-KKVNIKQHVDRYELENVTILLFLLQ 280
V WL+ NA KK IK VDRY L+N ++ L +
Sbjct: 310 VKWLNTNATKKDTIKPQVDRYTLKNGRHVILLAE 343
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3
Query: 522 GPYKPDHYRY 551
GPYKPDHYRY
Sbjct: 428 GPYKPDHYRY 437
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 128 bits (310), Expect = 3e-30
Identities = 62/91 (68%), Positives = 73/91 (80%), Gaps = 3/91 (3%)
Frame = +1
Query: 244 IRKCNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADT---YPIGVHTL 414
++ H+I+LA GRLVNLGCATGH SFVMSNSFTNQVLAQ+ELWTK T Y +G++ L
Sbjct: 332 LKNGRHVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQVELWTKFGTPQEYKLGLYVL 391
Query: 415 PKKLDEEVAALHLDHLGVKLTKLTPKQAKYI 507
PK LDEEVA LHL LGVKLTKL+ +QA Y+
Sbjct: 392 PKTLDEEVAYLHLAQLGVKLTKLSDEQASYL 422
Score = 112 bits (270), Expect = 2e-25
Identities = 55/94 (58%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 NALQAAMEGFQVTTMEEAAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEID 181
NALQAAMEG++VTT+EEAA I VTTTG DI+ +H + +DAIVCN+GHFDCEID
Sbjct: 250 NALQAAMEGYEVTTLEEAAPKANIIVTTTGCKDIVTGKHFELLPNDAIVCNVGHFDCEID 309
Query: 182 VAWLDNNA-KKVNIKQHVDRYELENVTILLFLLQ 280
V WL+ NA KK IK VDRY L+N ++ L +
Sbjct: 310 VKWLNTNATKKDTIKPQVDRYTLKNGRHVILLAE 343
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3
Query: 522 GPYKPDHYRY 551
GPYKPDHYRY
Sbjct: 428 GPYKPDHYRY 437
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 128 bits (310), Expect = 3e-30
Identities = 62/91 (68%), Positives = 73/91 (80%), Gaps = 3/91 (3%)
Frame = +1
Query: 244 IRKCNHIIVLAAGRLVNLGCATGHSSFVMSNSFTNQVLAQIELWTKADT---YPIGVHTL 414
++ H+I+LA GRLVNLGCATGH SFVMSNSFTNQVLAQ+ELWTK T Y +G++ L
Sbjct: 332 LKNGRHVILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQVELWTKFGTPQEYKLGLYVL 391
Query: 415 PKKLDEEVAALHLDHLGVKLTKLTPKQAKYI 507
PK LDEEVA LHL LGVKLTKL+ +QA Y+
Sbjct: 392 PKTLDEEVAYLHLAQLGVKLTKLSDEQASYL 422
Score = 112 bits (270), Expect = 2e-25
Identities = 55/94 (58%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 NALQAAMEGFQVTTMEEAAEVGQIFVTTTGNIDIICKEHLLRMKDDAIVCNIGHFDCEID 181
NALQAAMEG++VTT+EEAA I VTTTG DI+ +H + +DAIVCN+GHFDCEID
Sbjct: 250 NALQAAMEGYEVTTLEEAAPKANIIVTTTGCKDIVTGKHFELLPNDAIVCNVGHFDCEID 309
Query: 182 VAWLDNNA-KKVNIKQHVDRYELENVTILLFLLQ 280
V WL+ NA KK IK VDRY L+N ++ L +
Sbjct: 310 VKWLNTNATKKDTIKPQVDRYTLKNGRHVILLAE 343
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3
Query: 522 GPYKPDHYRY 551
GPYKPDHYRY
Sbjct: 428 GPYKPDHYRY 437
>U29488-1|AAA68773.2| 338|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 31 protein.
Length = 338
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 318 GMAGCAT*INQSSCSKNNNMVTFSNS*RSTCCLMLTFFALLSSHATSISQSK 163
G C+ S C +N+ ++N S CC+ L F LLS +A + +K
Sbjct: 89 GSDRCSILFQSSECLIESNLYYYTNLFSSLCCISLFFDRLLSLNAKTSYNTK 140
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 355 LAQIELWTKADTYPIGVHTLPKKLDEEVAALHLDHLGVKL 474
LA +E+ + D Y + +H K +D AAL + HLG+K+
Sbjct: 222 LAMLEVARRCDFYGVKLHAA-KDIDGNDAALSVMHLGIKV 260
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,725,419
Number of Sequences: 27780
Number of extensions: 332580
Number of successful extensions: 755
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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