Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1342
         (1027 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P...    30   5.9  
BT025818-1|ABF85718.1| 1416|Drosophila melanogaster IP03271p pro...    29   7.9  
BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p pro...    29   7.9  
AF053358-1|AAC35280.1| 1383|Drosophila melanogaster guanine nucl...    29   7.9  
AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,...    29   7.9  
AE014298-951|AAO41635.1| 1520|Drosophila melanogaster CG3126-PB,...    29   7.9  

>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
           protein.
          Length = 1333

 Score = 29.9 bits (64), Expect = 5.9
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -1

Query: 442 RSAECMNQMSETAVPLVLSSITIATTSHQ*G 350
           +  EC  Q+S  ++ LV+S+IT+AT +H  G
Sbjct: 701 QQCECHAQVSIASLLLVISAITVATNTHDYG 731


>BT025818-1|ABF85718.1| 1416|Drosophila melanogaster IP03271p
           protein.
          Length = 1416

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 516 GKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 641
           G D L+V  R    + QC F S ++HS+ E  ++      RS
Sbjct: 503 GVDRLSVRSRSPDENSQCSFDSALNHSREEEDQQQQHQHLRS 544


>BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p
           protein.
          Length = 1506

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 516 GKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 641
           G D L+V  R    + QC F S ++HS+ E  ++      RS
Sbjct: 607 GVDRLSVRSRSPDENSQCSFDSALNHSREEEDQQQQHQHLRS 648


>AF053358-1|AAC35280.1| 1383|Drosophila melanogaster guanine
           nucleotide exchange factorDC3G protein.
          Length = 1383

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 516 GKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 641
           G D L+V  R    + QC F S ++HS+ E  ++      RS
Sbjct: 469 GVDRLSVRSRSPDENSQCSFDSALNHSREEEDQQQQHQHLRS 510


>AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,
           isoform A protein.
          Length = 1571

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 516 GKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 641
           G D L+V  R    + QC F S ++HS+ E  ++      RS
Sbjct: 607 GVDRLSVRSRSPDENSQCSFDSALNHSREEEDQQQQHQHLRS 648


>AE014298-951|AAO41635.1| 1520|Drosophila melanogaster CG3126-PB,
           isoform B protein.
          Length = 1520

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 516 GKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 641
           G D L+V  R    + QC F S ++HS+ E  ++      RS
Sbjct: 607 GVDRLSVRSRSPDENSQCSFDSALNHSREEEDQQQQHQHLRS 648


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,629,528
Number of Sequences: 53049
Number of extensions: 892624
Number of successful extensions: 1841
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1841
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 5242675968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)