Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1341
(685 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 48 4e-06
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 47 1e-05
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 47 1e-05
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 44 7e-05
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 43 2e-04
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 42 4e-04
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 41 7e-04
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 41 9e-04
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 38 0.005
At2g19640.2 68415.m02295 SET domain-containing protein contains ... 29 2.2
At2g19640.1 68415.m02294 SET domain-containing protein contains ... 29 2.2
At5g18820.1 68418.m02236 chaperonin, putative similar to SWISS-P... 29 2.9
At2g33210.1 68415.m04069 chaperonin, putative similar to SWISS-P... 29 2.9
At1g60130.1 68414.m06774 jacalin lectin family protein similar t... 29 3.8
At1g53165.1 68414.m06023 protein kinase, putative similar to ser... 28 5.0
At5g40470.1 68418.m04908 expressed protein 28 6.6
At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to... 28 6.6
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 28 6.6
At2g05400.1 68415.m00568 meprin and TRAF homology domain-contain... 28 6.6
At1g61810.1 68414.m06972 glycosyl hydrolase family 1 protein con... 28 6.6
At5g10250.1 68418.m01190 phototropic-responsive protein, putativ... 27 8.8
At1g72840.1 68414.m08425 disease resistance protein (TIR-NBS-LRR... 27 8.8
At1g17590.3 68414.m02169 CCAAT-binding transcription factor (CBF... 27 8.8
At1g17590.2 68414.m02168 CCAAT-binding transcription factor (CBF... 27 8.8
At1g17590.1 68414.m02167 CCAAT-binding transcription factor (CBF... 27 8.8
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 294 YRAIT-SLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFD 470
+ A T +++ + P + LLS+GG + + + + + +R +FI S + +A YGF
Sbjct: 55 FHAFTETVQQRNPHVKTLLSIGGG--NADKDAFASMASNPDSRASFIQSTITVARSYGFH 112
Query: 471 GIDLAWQFPR 500
G+DL W++PR
Sbjct: 113 GLDLDWEYPR 122
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +3
Query: 309 SLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAW 488
++K + P + LLS+GG + + + Q+R FI+S + +A GF G+DLAW
Sbjct: 73 TVKIRNPQVKTLLSIGGK--NANNSAFASMASNHQSRKTFIDSWIFIARSNGFHGLDLAW 130
Query: 489 QFP 497
++P
Sbjct: 131 EYP 133
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +3
Query: 309 SLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAW 488
+++ + P + LLS+GG + Y + + +R +FI+S + +A YGF G+DL W
Sbjct: 82 TVQRRNPSVKTLLSIGGGI--ADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDW 139
Query: 489 QFP 497
++P
Sbjct: 140 EYP 142
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +3
Query: 312 LKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQ 491
+K K P + LLS+GG + + + + +R +FI S + A Y FDG+DL W+
Sbjct: 72 VKKKNPHVQTLLSIGGR--NADKSAFASMASNPTSRKSFIWSAISSARYYRFDGLDLVWK 129
Query: 492 FPR 500
+P+
Sbjct: 130 YPK 132
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/82 (30%), Positives = 41/82 (50%)
Frame = +3
Query: 309 SLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAW 488
+++ + P + LLS+GGD + + + +R FI+S + LA GF G+DL W
Sbjct: 80 TVRRRNPTVKTLLSIGGDFTYNFA--FASMASNPTSRKLFISSSIKLARSCGFHGLDLNW 137
Query: 489 QFPRVKPRRSARPGDRFGMELR 554
++P + D FG LR
Sbjct: 138 KYPSITTEM-----DNFGKLLR 154
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 396 LLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPR 500
+ S R +FI S + +A YGFDG+DL W++PR
Sbjct: 1 MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPR 35
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +3
Query: 309 SLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAW 488
++K K + LLS+GG D ++ ++ S+ R AFI+S + +A + F G+DLAW
Sbjct: 78 TVKEKNTDVQTLLSIGGK-DADKAVLASMASNSKN-RKAFIDSSIDIARKKDFYGLDLAW 135
Query: 489 QFP 497
++P
Sbjct: 136 EYP 138
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 40.7 bits (91), Expect = 9e-04
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +3
Query: 309 SLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAW 488
++K K + LLS+GG D ++ ++ S+ R AFI+S + +A + F G+DLAW
Sbjct: 70 TVKDKNTDVQTLLSIGGK-DADKAVLASMASNSKN-RKAFIDSSIDIARKKDFYGLDLAW 127
Query: 489 QFP 497
++P
Sbjct: 128 EYP 130
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 38.3 bits (85), Expect = 0.005
Identities = 13/34 (38%), Positives = 25/34 (73%)
Frame = +3
Query: 396 LLESQQARTAFINSGVLLAEQYGFDGIDLAWQFP 497
++ ++ +R +FI+S + +A GF G+DLAW++P
Sbjct: 79 IVSNRTSRESFISSSISIARSLGFYGLDLAWEYP 112
>At2g19640.2 68415.m02295 SET domain-containing protein contains
Pfam profile PF00856: SET domain
Length = 398
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -1
Query: 490 CQARSIPS--KPYCSANSTPELMKAVRACCDSSRRLYFSGSSVSASPPTD 347
CQ+ S+ S P C A+ TP L C+S RRL+ S SS + P+D
Sbjct: 75 CQSCSLVSFCSPNCFASHTPWL-------CESLRRLHQSSSSAFSDQPSD 117
>At2g19640.1 68415.m02294 SET domain-containing protein contains
Pfam profile PF00856: SET domain
Length = 341
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -1
Query: 490 CQARSIPS--KPYCSANSTPELMKAVRACCDSSRRLYFSGSSVSASPPTD 347
CQ+ S+ S P C A+ TP L C+S RRL+ S SS + P+D
Sbjct: 75 CQSCSLVSFCSPNCFASHTPWL-------CESLRRLHQSSSSAFSDQPSD 117
>At5g18820.1 68418.m02236 chaperonin, putative similar to
SWISS-PROT:P08926- RuBisCO subunit binding-protein alpha
subunit, chloroplast precursor (60 kDa chaperonin alpha
subunit, CPN-60 alpha)[Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 575
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +3
Query: 270 DIDRTHDNY--RAITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGV 443
D+ T ++Y + I AK G ++ VGG +TE ++ + +++ A A + G+
Sbjct: 383 DLAETDNSYLSKKIAERIAKLTGGVAVIKVGGHTETELEDRKLRIEDAKNATFAAMREGI 442
Query: 444 LLAEQYGFDGIDLAWQFPRVKPRRSARPGDRFGMEL 551
+ G I L + PR+K ++ G ++
Sbjct: 443 VPGG--GATYIHLLDEIPRIKKNLMEDSYEQIGADI 476
>At2g33210.1 68415.m04069 chaperonin, putative similar to
SWISS-PROT:Q05046- chaperonin CPN60-2, mitochondrial
precursor (HSP60-2) [Cucurbita maxima]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 585
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 318 AKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVL 446
AK G +L +GG ++TE EK + + ++ A A + G++
Sbjct: 401 AKLSGGVAVLKIGGASETEVSEKKDRVTDALNATKAAVEEGIV 443
>At1g60130.1 68414.m06774 jacalin lectin family protein similar to
myrosinase-binding protein homolog [Arabidopsis
thaliana] GI:2997767; contains Pfam profile PF01419
jacalin-like lectin domain
Length = 600
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 497 KS*AKKIRSTWGSLWHGIKKTFGTTPVDEKESEHREGF 610
KS +K +S +G W G +TF ++++ E EGF
Sbjct: 59 KSGQRKYKSFYGPSWAGFTQTFKINHKEDEQLESVEGF 96
>At1g53165.1 68414.m06023 protein kinase, putative similar to
serine/threonine protein kinase 24 [Homo sapiens]
SWISS-PROT:Q9Y6E0
Length = 1007
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 242 ISWCLKREPGHRPNTRQL 295
+S+CLK+ P RPN ++L
Sbjct: 571 VSFCLKKAPAERPNAKEL 588
>At5g40470.1 68418.m04908 expressed protein
Length = 496
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1
Query: 508 GLTLGNCQARSIPSKPYCSANSTPELMKAVRACCDSSRRLYFSGSSVSAS 359
G+T+G +RS + EL+ + +CC + R L F + VS+S
Sbjct: 88 GVTIGTTPSRSDEEHLKAETIFSDELISIISSCCFNLRNLCFLINPVSSS 137
>At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to
SWISS-PROT:P29197- chaperonin CPN60, mitochondrial
precursor (HSP60) [Arabidopsis thaliana]
Length = 577
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 318 AKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVL 446
AK G +L +GG ++ E EK + + ++ A A + G+L
Sbjct: 400 AKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAVEEGIL 442
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -1
Query: 547 SMPKRSPGRADLLGLTLGNCQARSIPSKPYCSANST 440
++ + P + + ++LGN Q +S PS+ Y S+N +
Sbjct: 141 ALTEAGPQTSVIFHVSLGNIQIQSFPSRAYFSSNKS 176
>At2g05400.1 68415.m00568 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein supported by
tandem duplication of meprin and TRAF homology (MATH)
domain protein (GI:4914358) (TIGR_Ath1:At2g05420)
[Arabidopsis thaliana]
Length = 194
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 448 WLNNMVSMELTSPGSSQELSQEDPLDLGIALAW 546
++N ++S+ T S QELS +D D G ALA+
Sbjct: 87 YMNVLLSLTQTICQSPQELSNDDLSDAGAALAY 119
>At1g61810.1 68414.m06972 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to beta-glucosidase (GI:3820531) [Pinus
contorta]; similar to beta-glucosidase GI:804655 from
(Hordeum vulgare)
Length = 520
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 294 YRAITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGF-D 470
++ + LK +YP + + ++ G D ++PE + L + R ++ SG L A Q D
Sbjct: 398 HKMLNYLKDRYPNMPMFITENGFGDLQKPETTDKELLNDTKRIQYM-SGYLEALQAAMRD 456
Query: 471 GIDLAWQF 494
G ++ F
Sbjct: 457 GANVKGYF 464
>At5g10250.1 68418.m01190 phototropic-responsive protein, putative
similar to root phototropism RPT2 [Arabidopsis thaliana]
gi|6959488|gb|AAF33112, a signal transducer of
phototropic response PMID:10662859
Length = 607
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +2
Query: 509 KKIRSTWGSLWHGIKKTFGTTPVDE--KESEHREGFTALVRELKQALSTS 652
+K WG W +KK+F T DE +E R T ++ +S S
Sbjct: 558 QKSSHNWGLRWQKVKKSFQTKREDEETRERTRRRSSTGQRTSFRRRMSMS 607
>At1g72840.1 68414.m08425 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1183
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -1
Query: 616 GSETFTVLRFLLIDWRGAECLLN--SMPKRSPGRADLLGLTLGNCQA 482
G+ + +L F + + L+ S+ K +PGR +LL L+L NC++
Sbjct: 881 GAGRYNLLDFCVEKCKSLGSLMGILSVEKSAPGRNELLELSLENCKS 927
>At1g17590.3 68414.m02169 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
subunit B
Length = 328
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 545 HAKAIPRSSGSSWLNSWELPGEVNSIETILFSQQHSGINESSTGLLRFQ 399
HA PR SG +LN+ +L + + + QQH+ N S L + Q
Sbjct: 215 HALKRPRGSGGRFLNTKKLQESTDPKQDMPIQQQHATGNMSRFVLYQLQ 263
>At1g17590.2 68414.m02168 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
subunit B
Length = 328
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 545 HAKAIPRSSGSSWLNSWELPGEVNSIETILFSQQHSGINESSTGLLRFQ 399
HA PR SG +LN+ +L + + + QQH+ N S L + Q
Sbjct: 215 HALKRPRGSGGRFLNTKKLQESTDPKQDMPIQQQHATGNMSRFVLYQLQ 263
>At1g17590.1 68414.m02167 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
subunit B
Length = 328
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 545 HAKAIPRSSGSSWLNSWELPGEVNSIETILFSQQHSGINESSTGLLRFQ 399
HA PR SG +LN+ +L + + + QQH+ N S L + Q
Sbjct: 215 HALKRPRGSGGRFLNTKKLQESTDPKQDMPIQQQHATGNMSRFVLYQLQ 263
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,236,181
Number of Sequences: 28952
Number of extensions: 317296
Number of successful extensions: 975
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1447936096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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