Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1339
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   6.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   6.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   6.7  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 257 GVEDHCIDSVAFWTALRSGSWL 192
           G++   + S A+W    +GSWL
Sbjct: 178 GIKSDSVTSNAWWDVHSTGSWL 199


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 404 SAWLVELPSKFHIGRSL 354
           SA LVEL  +FH G+ L
Sbjct: 97  SAQLVELEREFHHGKYL 113


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 391 TNQADGHNSDTYLVPRA 441
           T QAD  + DT L PRA
Sbjct: 523 TEQADSASVDTRLWPRA 539


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -1

Query: 572 IILAFVVSFL-TTDAIVALCWLL 507
           ++L F +SFL  T  I ALC +L
Sbjct: 876 LLLMFGISFLLVTQTIFALCVVL 898


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 404 SAWLVELPSKFHIGRSL 354
           SA LVEL  +FH G+ L
Sbjct: 88  SAQLVELEREFHHGKYL 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,370
Number of Sequences: 336
Number of extensions: 3614
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)