Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1339
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50671| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 2e-29
SB_16495| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_30815| Best HMM Match : Sas10_Utp3 (HMM E-Value=1) 29 3.3
SB_21215| Best HMM Match : DUF1279 (HMM E-Value=0.54) 29 3.3
SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2) 29 3.3
SB_28106| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_4830| Best HMM Match : Rad10 (HMM E-Value=9.7) 29 3.3
SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_14242| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_50203| Best HMM Match : DUF371 (HMM E-Value=5.8) 28 5.7
>SB_50671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 403
Score = 126 bits (303), Expect = 2e-29
Identities = 54/87 (62%), Positives = 69/87 (79%)
Frame = +1
Query: 262 DKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLVPRA 441
D++ A YIW+DGSGE +RCK RTL+ PK+ +DLPIWNFDGSST QA+G NSD YL P
Sbjct: 25 DRVQALYIWVDGSGEGIRCKSRTLDKPPKSHEDLPIWNFDGSSTAQAEGCNSDVYLHPIN 84
Query: 442 IYKDPFRRGNHILVMCDTYKYNRSQQR 522
I+KDPFR GN+ILV+C+TY+++ R
Sbjct: 85 IFKDPFRGGNNILVLCETYQFDHKPTR 111
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +3
Query: 510 EPTESNNRISCQEAYD--KCKDDEPWFGIEQEYILLDSDLRPFGWPR 644
+PT +N R +C + + K K PWFGIEQEY LLD D P GWP+
Sbjct: 108 KPTRTNKRKTCFDVMESEKVKPHRPWFGIEQEYTLLDIDGHPLGWPK 154
>SB_16495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 851
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 3 PPREAIETFYAPTKPFVNTFSRNIQHSHRGNISRHNRALPVSKW 134
PP A E F +P V T + I HS + + R P KW
Sbjct: 660 PPMRAFEQFLVRKRPAVGTANYQIHHSAEDMLQKRRRLCP--KW 701
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 1879 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1920
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 1889 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1930
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 1899 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1940
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 1909 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1950
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 1919 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1960
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 1929 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1970
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 1939 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1980
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 1949 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1990
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 1959 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2000
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 1969 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2010
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 1979 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2020
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 1989 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2030
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 1999 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2040
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 2009 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2050
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 2019 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2060
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 2029 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2070
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 2039 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2080
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 2049 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2090
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 2059 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2100
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 2069 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2110
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 2079 NCCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 2120
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 1849 NCCTHEYGWNNCCTHEYGWNICCTHEY-GWNNCCTHEYGWNNC 1890
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 508 CCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
CC + Y C G + C HE G C H+ GW +C
Sbjct: 1870 CCTHEYGWNNCCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1910
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 511 SCCIYTYHT*RGCDFLDGMDPCK*HEVRGRYQNCAHQLGWLSC 383
+CC + Y C G + C HE G C H+ GW +C
Sbjct: 1859 NCCTHEYGWNICCTHEYGWNNCCTHEY-GWNNCCTHEYGWNNC 1900
>SB_30815| Best HMM Match : Sas10_Utp3 (HMM E-Value=1)
Length = 864
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/83 (30%), Positives = 33/83 (39%)
Frame = +2
Query: 116 LTCFKMADTAHTKIEDNPKILSGPVLTNSPNAVLSKTLLSRYNDLPRRLTRFSPPTFGST 295
L C + AH K+ P I PVL S LS + +S Y + PP T
Sbjct: 689 LACLETRGRAHEKVVYGPDI---PVL--SQRLPLSLSRVSEYGSGMTAVDGVCPPICPQT 743
Query: 296 ALANT*GAKIAP*ISYLKLPKIC 364
+ T A I + +L KIC
Sbjct: 744 HMTPTAPASIGGDVRSFRLQKIC 766
>SB_21215| Best HMM Match : DUF1279 (HMM E-Value=0.54)
Length = 756
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/83 (30%), Positives = 33/83 (39%)
Frame = +2
Query: 116 LTCFKMADTAHTKIEDNPKILSGPVLTNSPNAVLSKTLLSRYNDLPRRLTRFSPPTFGST 295
L C + AH K+ P I PVL S LS + +S Y + PP T
Sbjct: 549 LACLETRGRAHEKVVYGPDI---PVL--SQRLPLSLSRVSEYGSGMTAVDGVCPPICPQT 603
Query: 296 ALANT*GAKIAP*ISYLKLPKIC 364
+ T A I + +L KIC
Sbjct: 604 HMTPTAPASIGGDVRSFRLQKIC 626
>SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2)
Length = 2527
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 221 WTALRSGSWLKPAPIESSDYLLFWYALYQPF 129
W GSWL+ P+ +LLF Y Q F
Sbjct: 1880 WEDTEEGSWLREYPVTLIQFLLFLYNNVQQF 1910
>SB_28106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1206
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 448 KDPFR-RGNHILVMCDTYKYNRSQQRATIASVVKKLTTNAR 567
+DPFR R ++I++MC T+ YN++ ++L +AR
Sbjct: 361 RDPFRGRFDYIVLMCPTFVYNKTYDGFGEGDDPRRLAFSAR 401
>SB_4830| Best HMM Match : Rad10 (HMM E-Value=9.7)
Length = 231
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 54 NTFSRNIQHSHRGNISRHNRAL 119
NT + IQHS+ G + HN AL
Sbjct: 110 NTITDRIQHSNMGEVDNHNHAL 131
>SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2806
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 9 REAIETFYAPTKPFVNTFSRNIQHSHRG 92
R+A+E KP++N F+R+ Q S+ G
Sbjct: 2154 RDAVENGQVDLKPYLNCFTRHNQKSYHG 2181
>SB_14242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -2
Query: 337 NSRCDLCT-SGVRQSRRSKCRWRESCQPAW 251
+SRC+L S V +++ +WRE C AW
Sbjct: 87 DSRCELLDISVVENNKKDLFQWREGCVVAW 116
>SB_50203| Best HMM Match : DUF371 (HMM E-Value=5.8)
Length = 349
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 513 PTESNNRISCQEAYDKCKDDEPWF 584
P ++N +S Q ++C D EPWF
Sbjct: 161 PEKANIMLSSQTYKEECTDTEPWF 184
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,119,341
Number of Sequences: 59808
Number of extensions: 478323
Number of successful extensions: 1415
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1413
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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