Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1338
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      25   3.0  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   4.0  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    24   4.0  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   4.0  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   5.2  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   6.9  

>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +1

Query: 415 PHLISVRFDKVRFRSGQRRNRAGNVFADCCETLALARLISSCC 543
           P +I+   + + +    RRNR       CC TL    ++  CC
Sbjct: 148 PGIITSLLNLLMYLDDARRNRRDR--QPCCSTLLCVVVVPFCC 188


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 593 ASVLRAWGGKTENILAGQQELIKRAKA 513
           ASV  A GG+    L GQQ L+ R  A
Sbjct: 496 ASVGNATGGQLAGELPGQQRLLSRQPA 522


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 478 LYSFAGRF*IELCQISRLLNEDELTDSN 395
           L   +G + + LC+IS    E E +DSN
Sbjct: 256 LMIISGAYTVILCEISNRSREKETSDSN 283


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 514 ALARLISSCCPARMFSVFPPQARS 585
           +L R+++  C A M  VFP Q  S
Sbjct: 264 SLERVMTEACDAAMARVFPSQGHS 287


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +3

Query: 501 LRDVGLSTLDQLLLSGENVLGLPSPGAEHRSLEGAPVAERQNPGP 635
           LR +GL+ LDQ+  S   +    +PG +        VA RQ P P
Sbjct: 419 LRSIGLTELDQIAAS---MHPRKAPGLDGVPNAALTVALRQQPEP 460


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 658 LSTLWTSRGPGF*RSATGAPSRLRCSAP 575
           L  +W S  PG   +  G  + L C AP
Sbjct: 67  LQRIWCSNTPGLVAAEIGGTTFLSCYAP 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,886
Number of Sequences: 2352
Number of extensions: 13082
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)