Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1338
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 91 7e-19
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 91 7e-19
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 85 6e-17
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 85 6e-17
Z68104-7|CAI79159.1| 1086|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z68104-4|CAA92116.1| 1107|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z68104-3|CAA92115.1| 1119|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF232770-1|AAF37866.1| 1107|Caenorhabditis elegans SLO-2 potassi... 30 1.8
AF173828-1|AAD51350.1| 1119|Caenorhabditis elegans putative pota... 30 1.8
Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc ... 28 7.3
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 27 9.6
U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical p... 27 9.6
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 91.1 bits (216), Expect = 7e-19
Identities = 42/61 (68%), Positives = 51/61 (83%)
Frame = -1
Query: 692 QSEEEASVHLNAINAVDLKRPWVLTFSYGRALQASVLRAWGGKTENILAGQQELIKRAKA 513
QSE +A+ +LNAIN+V L +PW LTFSYGRALQASVL+AWGGK ENI A Q+ L+ R+KA
Sbjct: 278 QSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKA 337
Query: 512 N 510
N
Sbjct: 338 N 338
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 91.1 bits (216), Expect = 7e-19
Identities = 42/61 (68%), Positives = 51/61 (83%)
Frame = -1
Query: 692 QSEEEASVHLNAINAVDLKRPWVLTFSYGRALQASVLRAWGGKTENILAGQQELIKRAKA 513
QSE +A+ +LNAIN+V L +PW LTFSYGRALQASVL+AWGGK ENI A Q+ L+ R+KA
Sbjct: 278 QSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKA 337
Query: 512 N 510
N
Sbjct: 338 N 338
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 84.6 bits (200), Expect = 6e-17
Identities = 39/61 (63%), Positives = 47/61 (77%)
Frame = -1
Query: 692 QSEEEASVHLNAINAVDLKRPWVLTFSYGRALQASVLRAWGGKTENILAGQQELIKRAKA 513
QSEE+A+++LNAIN V K+PW LTFSYGRALQAS L W GK ENI A Q+ L+ RA+
Sbjct: 276 QSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQV 335
Query: 512 N 510
N
Sbjct: 336 N 336
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 507 LAAVGKYVAGSIPSLAASKSNFVKSHAY 424
LA+VGKY + AAS+S FV +H+Y
Sbjct: 338 LASVGKYTGDASADAAASQSLFVANHSY 365
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 84.6 bits (200), Expect = 6e-17
Identities = 39/61 (63%), Positives = 47/61 (77%)
Frame = -1
Query: 692 QSEEEASVHLNAINAVDLKRPWVLTFSYGRALQASVLRAWGGKTENILAGQQELIKRAKA 513
QSEE+A+++LNAIN V K+PW LTFSYGRALQAS L W GK ENI A Q+ L+ RA+
Sbjct: 277 QSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQV 336
Query: 512 N 510
N
Sbjct: 337 N 337
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 507 LAAVGKYVAGSIPSLAASKSNFVKSHAY 424
LA+VGKY + AAS+S FV +H+Y
Sbjct: 339 LASVGKYTGDASADAAASQSLFVANHSY 366
>Z68104-7|CAI79159.1| 1086|Caenorhabditis elegans Hypothetical
protein F08B12.3c protein.
Length = 1086
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -2
Query: 253 FFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYDALVWLVHFVLYCSIVFPYVV 95
F F FL+T+ +YT+ F ++ L+ +HF+L FP+++
Sbjct: 99 FDFKIWFLQTMFACISMVYTILVFYLSYSGSVVRLLINIHFLLELITSFPFII 151
>Z68104-4|CAA92116.1| 1107|Caenorhabditis elegans Hypothetical
protein F08B12.3b protein.
Length = 1107
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -2
Query: 253 FFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYDALVWLVHFVLYCSIVFPYVV 95
F F FL+T+ +YT+ F ++ L+ +HF+L FP+++
Sbjct: 120 FDFKIWFLQTMFACISMVYTILVFYLSYSGSVVRLLINIHFLLELITSFPFII 172
>Z68104-3|CAA92115.1| 1119|Caenorhabditis elegans Hypothetical
protein F08B12.3a protein.
Length = 1119
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -2
Query: 253 FFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYDALVWLVHFVLYCSIVFPYVV 95
F F FL+T+ +YT+ F ++ L+ +HF+L FP+++
Sbjct: 120 FDFKIWFLQTMFACISMVYTILVFYLSYSGSVVRLLINIHFLLELITSFPFII 172
>AF232770-1|AAF37866.1| 1107|Caenorhabditis elegans SLO-2 potassium
channel protein.
Length = 1107
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -2
Query: 253 FFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYDALVWLVHFVLYCSIVFPYVV 95
F F FL+T+ +YT+ F ++ L+ +HF+L FP+++
Sbjct: 120 FDFKIWFLQTMFACISMVYTILVFYLSYSGSVVRLLINIHFLLELITSFPFII 172
>AF173828-1|AAD51350.1| 1119|Caenorhabditis elegans putative
potassium channel Slo-2 protein.
Length = 1119
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -2
Query: 253 FFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYDALVWLVHFVLYCSIVFPYVV 95
F F FL+T+ +YT+ F ++ L+ +HF+L FP+++
Sbjct: 120 FDFKIWFLQTMFACISMVYTILVFYLSYSGSVVRLLINIHFLLELITSFPFII 172
>Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical
protein M04B2.1 protein.
Length = 870
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = -1
Query: 602 ALQASVLRAWGGKTENILAGQQELIKRAKANVSQQSANTLPA 477
A+QAS+ R GG+ N LA Q L K+ A SQQ A L A
Sbjct: 636 AMQASLRR--GGQQGNSLAVSQLLQKQMAALKSQQGAQQLQA 675
>AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc
finger protein protein.
Length = 870
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = -1
Query: 602 ALQASVLRAWGGKTENILAGQQELIKRAKANVSQQSANTLPA 477
A+QAS+ R GG+ N LA Q L K+ A SQQ A L A
Sbjct: 636 AMQASLRR--GGQQGNSLAVSQLLQKQMAALKSQQGAQQLQA 675
>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
protein C25F9.2 protein.
Length = 1469
Score = 27.5 bits (58), Expect = 9.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 226 FLGMYYEKKKFHYINH 273
F+G++Y K F Y+NH
Sbjct: 441 FIGLFYYKNHFEYVNH 456
>U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical
protein C06A5.1 protein.
Length = 1932
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -2
Query: 265 CNETFFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKYDALVWLVHFVLYCSIVFP 104
CN F++ + I+ ++ + +FE +S+Y L +L+H +L FP
Sbjct: 700 CNRKFYW-TAWTTIILWIAAGTEIISFFE-EIYSEYPILRYLIHCILCQKFEFP 751
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,035,943
Number of Sequences: 27780
Number of extensions: 322324
Number of successful extensions: 810
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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