Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1337
         (692 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    74   6e-13
BC126358-1|AAI26359.1| 1059|Homo sapiens acyl-Coenzyme A dehydro...    30   6.8  
AY323912-1|AAQ88260.1| 1059|Homo sapiens ACAD 10 protein.              30   6.8  
AK097425-1|BAC05046.1|  492|Homo sapiens protein ( Homo sapiens ...    30   6.8  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 73.7 bits (173), Expect = 6e-13
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = -3

Query: 225 MIGRADIEGSKSNVAMNAWLPQASYPCGNFSGTSC*K 115
           MIGRADIEGSKS+VAMNAW PQASYPCGNFS TSC K
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 37


>BC126358-1|AAI26359.1| 1059|Homo sapiens acyl-Coenzyme A
           dehydrogenase family, member 10 protein.
          Length = 1059

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
 Frame = +1

Query: 367 PQFRTFGSCTRPSGRWCEXPSAGLCLNASKAEASLAESGKDMLTVEPQS-----REALNN 531
           P  R++ +  RP  +WC   S      +S  EAS A + +  L + P+S     RE  + 
Sbjct: 613 PLTRSYHTWARPQSQWCPTGSRSY---SSVPEASPAHTSRGGLVISPESLSPPVRELYHR 669

Query: 532 VTLLVAFRIQNARRDVEAH 588
           +   +  R+  A  ++++H
Sbjct: 670 LKHFMEQRVYPAEPELQSH 688


>AY323912-1|AAQ88260.1| 1059|Homo sapiens ACAD 10 protein.
          Length = 1059

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
 Frame = +1

Query: 367 PQFRTFGSCTRPSGRWCEXPSAGLCLNASKAEASLAESGKDMLTVEPQS-----REALNN 531
           P  R++ +  RP  +WC   S      +S  EAS A + +  L + P+S     RE  + 
Sbjct: 613 PLTRSYHTWARPQSQWCPTGSRSY---SSVPEASPAHTSRGGLVISPESLSPPVRELYHR 669

Query: 532 VTLLVAFRIQNARRDVEAH 588
           +   +  R+  A  ++++H
Sbjct: 670 LKHFMEQRVYPAEPELQSH 688


>AK097425-1|BAC05046.1|  492|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40106 fis, clone TESTI2006667, moderately
           similar to Probable acyl-CoA dehydrogenase. ).
          Length = 492

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
 Frame = +1

Query: 367 PQFRTFGSCTRPSGRWCEXPSAGLCLNASKAEASLAESGKDMLTVEPQS-----REALNN 531
           P  R++ +  RP  +WC   S      +S  EAS A + +  L + P+S     RE  + 
Sbjct: 215 PLTRSYHTWARPQSQWCPTGSRSY---SSVPEASPAHTSRGGLVISPESLSPPVRELYHR 271

Query: 532 VTLLVAFRIQNARRDVEAH 588
           +   +  R+  A  ++++H
Sbjct: 272 LKHFMEQRVYPAEPELQSH 290


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,210,892
Number of Sequences: 237096
Number of extensions: 2088688
Number of successful extensions: 7862
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7862
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)