Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1336
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    63   6e-09
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    47   4e-04
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    40   0.060
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    38   0.24 
UniRef50_A5LFU4 Cluster: Putative uncharacterized protein; n=2; ...    37   0.43 
UniRef50_A7RZL6 Cluster: Predicted protein; n=1; Nematostella ve...    36   1.3  
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   5.2  
UniRef50_A3HJ02 Cluster: Putative uncharacterized protein; n=1; ...    33   6.9  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 63.3 bits (147), Expect = 6e-09
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = +1

Query: 508 SGTRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG 636
           +GTRLALQ  LVK FKV SF+L+GL RV Y YFSSLPPR GSG
Sbjct: 61  AGTRLALQWILVKGFKVDSFQLQGLERVLYCYFSSLPPRVGSG 103



 Score = 35.1 bits (77), Expect = 1.7
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +2

Query: 452 SFLTATILVYAIGAGITAA 508
           SFLTA  L+YAIGAGITAA
Sbjct: 42  SFLTAATLIYAIGAGITAA 60


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 28/54 (51%), Positives = 31/54 (57%)
 Frame = +2

Query: 458 LTATILVYAIGAGITAALAPDLPSNCSSLKYLKCTHSDYEAS*ESRIVIFRHYL 619
           LTATIL+YAIGAGITAA    L       K L   HS+Y+      IVI  HYL
Sbjct: 314 LTATILIYAIGAGITAAAGTRLALQLIFGKVLSSHHSNYKTKIWPYIVISCHYL 367



 Score = 44.0 bits (99), Expect = 0.004
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +1

Query: 76  GKCFR*CSSCDDPRISPLTSQYECPQ 153
           GKCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 39.9 bits (89), Expect = 0.060
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +3

Query: 579 PRKSPVSLFFVTTSPCREW 635
           PRKSPV LFFVTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 37.9 bits (84), Expect = 0.24
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = -3

Query: 67 FHQSRTKVRGSKAIRYRPSSN 5
          F   RTKVRGSK IRYRPSSN
Sbjct: 6  FRCQRTKVRGSKTIRYRPSSN 26


>UniRef50_A5LFU4 Cluster: Putative uncharacterized protein; n=2;
           Streptococcus pneumoniae|Rep: Putative uncharacterized
           protein - Streptococcus pneumoniae SP3-BS71
          Length = 81

 Score = 37.1 bits (82), Expect = 0.43
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = -1

Query: 507 AAVIPAPIAYTKIVAVKKL 451
           AAVIPAPIAY K+VAVKKL
Sbjct: 4   AAVIPAPIAYIKVVAVKKL 22


>UniRef50_A7RZL6 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 73

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -1

Query: 507 AAVIPAPIAYTKIVAVKK 454
           AAVIPAPIAY K+VAVKK
Sbjct: 44  AAVIPAPIAYIKVVAVKK 61


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
          lucimarinus CCE9901|Rep: Predicted protein -
          Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -3

Query: 67 FHQSRTKVRGSKAIRYRPSSN 5
          FH  RTKV GSK IRY PS N
Sbjct: 6  FHCQRTKVGGSKMIRYHPSLN 26


>UniRef50_A3HJ02 Cluster: Putative uncharacterized protein; n=1;
            Pseudomonas putida GB-1|Rep: Putative uncharacterized
            protein - Pseudomonas putida (strain GB-1)
          Length = 1386

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 20/54 (37%), Positives = 30/54 (55%)
 Frame = +1

Query: 229  ARNIQAAFLPALSTLICSK*NCRPTSTLTEEHRDRILILNRRFLERRLTDDMLR 390
            ARN +A+FLPAL  L+ S+   RP   + +  R    +L    ++ RL D +LR
Sbjct: 902  ARNSRASFLPALDVLV-SRGYDRPNIIIRDSIRMLSELLGEHVVDERLKDRLLR 954


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,152,662
Number of Sequences: 1657284
Number of extensions: 14666325
Number of successful extensions: 35165
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35155
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)